RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 ADAM7Q9H2U9 754 aa12.57□□□□□ -0.4
CHEK1-201ENST00000278916 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
CHEK1-201ENST00000278916 CEP72Q9P209 647 aa12.57□□□□□ -0.4
CHEK1-201ENST00000278916 MRPS5P82675 430 aaKnown RBP12.56□□□□□ -0.4
CHEK1-201ENST00000278916 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 SMAD4Q13485 552 aaKnown RBP12.56□□□□□ -0.4
CHEK1-201ENST00000278916 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 CBX2Q14781 532 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-201ENST00000278916 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 CCDC149Q6ZUS6 474 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 GPR149Q86SP6 731 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 JAKMIP2Q96AA8 810 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 ASB2Q96Q27 587 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 CORO1BQ9BR76 489 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 MED10Q9BTT4 135 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
CHEK1-201ENST00000278916 CYP3A43Q9HB55 503 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 ACP6Q9NPH0 428 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 LIMA1Q9UHB6 759 aaKnown RBP12.56□□□□□ -0.4
CHEK1-201ENST00000278916 PCDHB4Q9Y5E5 795 aa12.56□□□□□ -0.4
CHEK1-201ENST00000278916 RNF225M0QZC1 329 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 TEX33O43247 280 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 HAPLN1P10915 354 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 GJA1P17302 382 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 ACO1P21399 889 aaKnown RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 RAD23BP54727 409 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 UBXN1Q04323 297 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 NFE2Q16621 373 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 SLC4A11Q8NBS3 891 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 SPATA18Q8TC71 538 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 SPPL2BQ8TCT7 592 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 ING5Q8WYH8 240 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 SUSD6Q92537 303 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 HEXIM2Q96MH2 286 aaKnown RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 NAP1L5Q96NT1 182 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 NT5C1AQ9BXI3 368 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 ZDHHC7Q9NXF8 308 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 DNMT3BQ9UBC3 853 aaKnown RBP12.55□□□□□ -0.4
CHEK1-201ENST00000278916 DPP7Q9UHL4 492 aa12.55□□□□□ -0.4
CHEK1-201ENST00000278916 FAM170AA1A519 330 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 LGALS16A8MUM7 142 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 EPHB6O15197 1021 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 BMP1P13497 986 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 KRT5P13647 590 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 GRIK1P39086 918 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 USP8P40818 1118 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ALDH1A3P47895 512 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ITIH3Q06033 890 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ATAT1Q5SQI0 421 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 DPY19L2P1Q6NXN4 242 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ELMSAN1Q6PJG2 1045 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 PAQR9Q6ZVX9 377 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 GET4Q7L5D6 327 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 FAM35AQ86V20 835 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 FUKQ8N0W3 1084 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 UBR7Q8N806 425 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ANKRD20A12PQ8NF67 263 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ATXN2LQ8WWM7 1075 aaKnown RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 TCEAL4Q96EI5 215 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 RPGRIP1Q96KN7 1286 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 TNIP3Q96KP6 325 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 KCNK16Q96T55 309 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 KRT82Q9NSB4 513 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 FAM207AQ9NSI2 230 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 APEX2Q9UBZ4 518 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 MAGED2Q9UNF1 606 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 FHOD1Q9Y613 1164 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 PTPRDP23468 1912 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 NOTCH4Q99466 2003 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 F8VP50 259 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 XYLBO75191 536 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 BEST1O76090 585 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 TPM2P07951 284 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 MYL4P12829 197 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 CD19P15391 556 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 TBXAS1P24557 533 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 CCR2P41597 374 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 PLD1Q13393 1074 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 RAPGEF1Q13905 1077 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 SYCP1Q15431 976 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 SMAD2Q15796 467 aaKnown RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 PPP1R26Q5T8A7 1209 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 IQCEQ6IPM2 695 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 C4orf50Q6ZRC1 276 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 UNC93AQ86WB7 457 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 CMASQ8NFW8 434 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ITFG1Q8TB96 612 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 TMEM176AQ96HP8 235 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 PCMTD1Q96MG8 357 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 ZNF334Q9HCZ1 680 aaPredicted RBP12.54□□□□□ -0.4
CHEK1-201ENST00000278916 DNAJC12Q9UKB3 198 aa12.54□□□□□ -0.4
CHEK1-201ENST00000278916 SERPINC1P01008 464 aa12.53□□□□□ -0.4
CHEK1-201ENST00000278916 RHOP08100 348 aa12.53□□□□□ -0.4
CHEK1-201ENST00000278916 HNRNPA1P09651 372 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHEK1-201ENST00000278916 FAM163BP0C2L3 166 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms