RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 ZNRF3Q9ULT6 936 aa28.86■■■□□ 2.21
CBX4-201ENST00000269397 ACADSP16219 412 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 PHBP35232 272 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 KLC1Q07866 573 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 MEX3CQ5U5Q3 659 aaKnown RBP28.85■■■□□ 2.21
CBX4-201ENST00000269397 WDR60Q8WVS4 1066 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 ZNF333Q96JL9 665 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 DLGAP2Q9P1A6 1054 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 ARMCX1Q9P291 453 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 CHMP2BQ9UQN3 213 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 TMEM63AO94886 807 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 CCDC60Q8IWA6 550 aaPredicted RBP28.85■■■□□ 2.21
CBX4-201ENST00000269397 PPIL6Q8IXY8 311 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 SLC35B2Q8TB61 432 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 KAT6AQ92794 2004 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 FAM111AQ96PZ2 611 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 ACSS3Q9H6R3 686 aa28.85■■■□□ 2.21
CBX4-201ENST00000269397 CPA2P48052 419 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 MRPS35P82673 323 aaKnown RBP28.84■■■□□ 2.21
CBX4-201ENST00000269397 MCUR1Q96AQ8 359 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 TARS2Q9BW92 718 aaKnown RBP28.84■■■□□ 2.21
CBX4-201ENST00000269397 KCNK13Q9HB14 408 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 CYP26B1Q9NR63 512 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 STOML1Q9UBI4 398 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 SNCAIPQ9Y6H5 919 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 CAPN9O14815 690 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 CST8O60676 142 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 DGAT1O75907 488 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 CST3P01034 146 aaPredicted RBP28.84■■■□□ 2.21
CBX4-201ENST00000269397 BGNP21810 368 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 RPL22P35268 128 aaKnown RBP28.84■■■□□ 2.21
CBX4-201ENST00000269397 PRKCEQ02156 737 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 VPS52Q8N1B4 723 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 NSL1Q96IY1 281 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 PIDD1Q9HB75 910 aa28.84■■■□□ 2.21
CBX4-201ENST00000269397 COL2A1P02458 1487 aaPredicted RBP28.84■■■□□ 2.21
CBX4-201ENST00000269397 LPXNO60711 386 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 RFC5P40937 340 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 NCOA4Q13772 614 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 IGDCC3Q8IVU1 814 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 SERAC1Q96JX3 654 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 PDLIM7Q9NR12 457 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 SMIM24O75264 130 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 NAT8LQ8N9F0 302 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 MCPH1Q8NEM0 835 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 SCG3Q8WXD2 468 aaKnown RBP28.83■■■□□ 2.21
CBX4-201ENST00000269397 SLC38A10Q9HBR0 1119 aa28.83■■■□□ 2.21
CBX4-201ENST00000269397 LRRIQ4A6NIV6 560 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 MT-ND3P03897 115 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 CD48P09326 243 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 VHLP40337 213 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 RASA2Q15283 850 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 UNC45BQ8IWX7 931 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 ZNF398Q8TD17 642 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 RSAD2Q8WXG1 361 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 ATP6V0A1Q93050 837 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 MSTO1Q9BUK6 570 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 SSU72Q9NP77 194 aaKnown RBP28.82■■■□□ 2.2
CBX4-201ENST00000269397 TJP2Q9UDY2 1190 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 H0YIN7 160 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 TBX10O75333 385 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 BASP1P80723 227 aaKnown RBP28.82■■■□□ 2.2
CBX4-201ENST00000269397 BAATQ14032 418 aaPredicted RBP28.82■■■□□ 2.2
CBX4-201ENST00000269397 RCN2Q14257 317 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 WNK4Q96J92 1243 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 DHRS4Q9BTZ2 278 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 VPS11Q9H270 941 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 TAS2R1Q9NYW7 299 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 FBXO40Q9UH90 709 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 XPO7Q9UIA9 1087 aaKnown RBP28.82■■■□□ 2.2
CBX4-201ENST00000269397 RIPK3Q9Y572 518 aa28.82■■■□□ 2.2
CBX4-201ENST00000269397 TCRBV5S1A1TA0A578 114 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 EDN1P05305 212 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 SPDYAQ5MJ70 313 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 GPAT2Q6NUI2 795 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 PPCSQ9HAB8 311 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 DOCK5Q9H7D0 1870 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 TM9SF1O15321 606 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 LMNAP02545 664 aaKnown RBP28.81■■■□□ 2.2
CBX4-201ENST00000269397 ASNSP08243 561 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 IL1R2P27930 398 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 KLHL38Q2WGJ6 581 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 LRRC38Q5VT99 294 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 FAM71DQ8N9W8 422 aa28.81■■■□□ 2.2
CBX4-201ENST00000269397 CTDP1Q9Y5B0 961 aaPredicted RBP28.81■■■□□ 2.2
CBX4-201ENST00000269397 C3orf70A6NLC5 250 aaPredicted RBP28.8■■■□□ 2.2
CBX4-201ENST00000269397 SIGLEC16A6NMB1 481 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 RNF220Q5VTB9 566 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 WDTC1Q8N5D0 677 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 FAM237BA0A1B0GVD1 139 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 CALB1P05937 261 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 ESRRAP11474 423 aaPredicted RBP28.8■■■□□ 2.2
CBX4-201ENST00000269397 TBXAS1P24557 533 aaPredicted RBP28.8■■■□□ 2.2
CBX4-201ENST00000269397 RFC1P35251 1148 aaPredicted RBP28.8■■■□□ 2.2
CBX4-201ENST00000269397 SCARA5Q6ZMJ2 495 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 SKA1Q96BD8 255 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 FAM136AQ96C01 138 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 TSC22D3Q99576 134 aa28.8■■■□□ 2.2
CBX4-201ENST00000269397 E5RJQ4 531 aa28.79■■■□□ 2.2
CBX4-201ENST00000269397 MYL2P10916 166 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms