RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 XYLT1Q86Y38 959 aa21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 RNF169Q8NCN4 708 aa21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 PGBD4Q96DM1 585 aa21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 DPEP3Q9H4B8 488 aa21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 RSAD1Q9HA92 442 aa21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 DMGDHQ9UI17 866 aaKnown RBP21.72■■□□□ 1.07
LYSMD2-201ENST00000267838 GOLGA8SH3BPF8 625 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 C1QTNF8P60827 252 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 SLC7A5Q01650 507 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 ZNF268Q14587 947 aaPredicted RBP21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 ADGRF2Q8IZF7 708 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 CRYBG2Q8N1P7 616 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 BEGAINQ9BUH8 593 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 DNAI2Q9GZS0 605 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 FAM49BQ9NUQ9 324 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 STIM2Q9P246 746 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 PTPN22Q9Y2R2 807 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 SIGLEC16A6NMB1 481 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 DNM1LO00429 736 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 HCRTO43612 131 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 ZMYND10O75800 440 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 PFKMP08237 780 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 PDGFRBP09619 1106 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 WARSP23381 471 aaKnown RBP21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 MBTPS1Q14703 1052 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 DAB2IPQ5VWQ8 1189 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 ARHGAP17Q68EM7 881 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 AENQ8WTP8 325 aaKnown RBP21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 SEZ6LQ9BYH1 1024 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 FAM204AQ9H8W3 233 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 CACNG4Q9UBN1 327 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 USTQ9Y2C2 406 aa21.71■■□□□ 1.07
LYSMD2-201ENST00000267838 PODXLO00592 558 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 CYB561D2O14569 222 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 PSTPIP1O43586 416 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 SYF2O95926 243 aaKnown RBP21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 KRT3P12035 628 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 IBSPP21815 317 aaPredicted RBP21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 LMO2P25791 158 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 TNFRSF8P28908 595 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 ZNF252P-AS1Q0IIN9 211 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 PKDCCQ504Y2 493 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 RHOT1Q8IXI2 618 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 IPO4Q8TEX9 1081 aaKnown RBP21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 PLVAPQ9BX97 442 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 UBN1Q9NPG3 1134 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 HESX1Q9UBX0 185 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 CEP350Q5VT06 3117 aa21.7■■□□□ 1.06
LYSMD2-201ENST00000267838 FAM163BP0C2L3 166 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 CDK7P50613 346 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 CLCNKBP51801 687 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 TAS2R40P59535 323 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 OGDHQ02218 1023 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 TTC30AQ86WT1 665 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 ECHDC2Q86YB7 292 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 MCRS1Q96EZ8 462 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 DDX27Q96GQ7 796 aaKnown RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 LPIN3Q9BQK8 851 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 DDX47Q9H0S4 455 aaKnown RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 PAK6Q9NQU5 681 aaPredicted RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 GOLGA6L10A0A0M3HER8 536 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 RAD51CO43502 376 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 SETSIPP0DME0 302 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 IGFBP6P24592 240 aaPredicted RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 RPL9P32969 192 aaKnown RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 PIGHQ14442 188 aaPredicted RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 ADAT2Q7Z6V5 191 aaKnown RBP21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 OSTM1Q86WC4 334 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 HINFPQ9BQA5 517 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 MIS12Q9H081 205 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 RGS18Q9NS28 235 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 NR2E1Q9Y466 385 aa21.69■■□□□ 1.06
LYSMD2-201ENST00000267838 CASTOR2A6NHX0 329 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 SART1O43290 800 aaKnown RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 MYCP01106 439 aaPredicted RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 RFC1P35251 1148 aaPredicted RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 SSR1P43307 286 aaKnown RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 ZNF598Q86UK7 904 aaKnown RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 SLC13A5Q86YT5 568 aaPredicted RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 NIPA2Q8N8Q9 360 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 JOSD2Q8TAC2 188 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 TNIP3Q96KP6 325 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 SENP8Q96LD8 212 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 SLITRK6Q9H5Y7 841 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 METTL5Q9NRN9 209 aaKnown RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 DNAH12Q6ZR08 3092 aa21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 TDRD15B5MCY1 1934 aaKnown RBP21.68■■□□□ 1.06
LYSMD2-201ENST00000267838 HEXIM1O94992 359 aaKnown RBP21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 POMCP01189 267 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 GLI1P08151 1106 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 EPHB4P54760 987 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 GRIK3Q13003 919 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 MTFR1Q15390 333 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 PPP2R5EQ16537 467 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 WSCD1Q658N2 575 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 EMBQ6PCB8 327 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 DEFB118Q96PH6 123 aa21.67■■□□□ 1.06
LYSMD2-201ENST00000267838 GOLGA6BA6NDN3 693 aa21.66■■□□□ 1.06
LYSMD2-201ENST00000267838 E5RJQ4 531 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms