RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 MYCBPAPQ8TBZ2 947 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 SMARCD2Q92925 531 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 ASB16Q96NS5 453 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 MKNK1Q9BUB5 465 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 ZFP14Q9HCL3 533 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 WNT16Q9UBV4 365 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 MYO10Q9HD67 2058 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 TECTAO75443 2155 aa19.67■□□□□ 0.74
COPE-201ENST00000262812 NOTCH4Q99466 2003 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 SLC38A8A6NNN8 435 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 PPP1R3GB7ZBB8 358 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 LRRN2O75325 713 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 HMGA1P17096 107 aaKnown RBP19.66■□□□□ 0.74
COPE-201ENST00000262812 FCARP24071 287 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 GRIK1P39086 918 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 VCPP55072 806 aaKnown RBP19.66■□□□□ 0.74
COPE-201ENST00000262812 LRRC63Q05C16 580 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 GRM2Q14416 872 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 CFAP221Q4G0U5 840 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 ARHGAP15Q53QZ3 475 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 DCAF17Q5H9S7 520 aaPredicted RBP19.66■□□□□ 0.74
COPE-201ENST00000262812 TCERG1LQ5VWI1 586 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 NELFBQ8WX92 580 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 TAF4BQ92750 862 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 ELSPBP1Q96BH3 223 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 PCED1BQ96HM7 432 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 FUBP3Q96I24 572 aaKnown RBP eCLIP19.66■□□□□ 0.74
COPE-201ENST00000262812 GCNAQ96QF7 691 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 GPR88Q9GZN0 384 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 IL21Q9HBE4 155 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 TMEM8AQ9HCN3 771 aa19.66■□□□□ 0.74
COPE-201ENST00000262812 KRBA1A5PL33 1030 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 CLDN5O00501 218 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 ASS1P00966 412 aaKnown RBP19.65■□□□□ 0.74
COPE-201ENST00000262812 CSH1P0DML2 217 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 CSH2P0DML3 217 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 GTF2H1P32780 548 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 STX17P56962 302 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 ORC1Q13415 861 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 IER5LQ5T953 404 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 KRT39Q6A163 491 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 IMPG2Q9BZV3 1241 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 APOBEC3GQ9HC16 384 aaKnown RBP19.65■□□□□ 0.74
COPE-201ENST00000262812 SLC2A4RGQ9NR83 387 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 CTNND2Q9UQB3 1225 aa19.65■□□□□ 0.74
COPE-201ENST00000262812 SLC16A3O15427 465 aaKnown RBP19.64■□□□□ 0.73
COPE-201ENST00000262812 STX10O60499 249 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 NPR3P17342 541 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 RFX1P22670 979 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 CDC25CP30307 473 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 AVPR2P30518 371 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 PPP1R2P41236 205 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 MAGEA11P43364 429 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 ENPEPQ07075 957 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 ACOT1Q86TX2 421 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 ARID3BQ8IVW6 561 aaPredicted RBP19.64■□□□□ 0.73
COPE-201ENST00000262812 ZC3H3Q8IXZ2 948 aaKnown RBP19.64■□□□□ 0.73
COPE-201ENST00000262812 B3GALNT2Q8NCR0 500 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 CCDC150Q8NCX0 1101 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 SEMA4DQ92854 862 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 DUSP9Q99956 384 aaKnown RBP19.64■□□□□ 0.73
COPE-201ENST00000262812 MED10Q9BTT4 135 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 B3GNT5Q9BYG0 378 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 KIAA1468Q9P260 1216 aa19.64■□□□□ 0.73
COPE-201ENST00000262812 ARMCX3Q9UH62 379 aaPredicted RBP19.64■□□□□ 0.73
COPE-201ENST00000262812 F11P03951 625 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 ANXA13P27216 316 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 ASPAP45381 313 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 NDST1P52848 882 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 NLRP12P59046 1061 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 ASTLQ6HA08 431 aaPredicted RBP19.63■□□□□ 0.73
COPE-201ENST00000262812 VSTM1Q6UX27 236 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 VITQ6UXI7 678 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 TMEM150AQ86TG1 271 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 RSPRY1Q96DX4 576 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 TRMT61BQ9BVS5 477 aaKnown RBP19.63■□□□□ 0.73
COPE-201ENST00000262812 SLC46A2Q9BY10 475 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 ZNF518BQ9C0D4 1074 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 SMG9Q9H0W8 520 aaKnown RBP19.63■□□□□ 0.73
COPE-201ENST00000262812 TASP1Q9H6P5 420 aa19.63■□□□□ 0.73
COPE-201ENST00000262812 HEPACAM2A8MVW5 462 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 F8VP50 259 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 DPYSL4O14531 572 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 PI15O43692 258 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 NOL4O94818 638 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 CD58P19256 250 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 GDI1P31150 447 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 MXI1P50539 228 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 CACNA2D1P54289 1103 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 MCCD1P59942 119 aaPredicted RBP19.62■□□□□ 0.73
COPE-201ENST00000262812 NOP14P78316 857 aaKnown RBP19.62■□□□□ 0.73
COPE-201ENST00000262812 CCDC40Q4G0X9 1142 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 SLC44A4Q53GD3 710 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 TXNDC8Q6A555 127 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 TTI2Q6NXR4 508 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 FILIP1Q7Z7B0 1213 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 MAB21L3Q8N8X9 362 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 TNIP3Q96KP6 325 aa19.62■□□□□ 0.73
COPE-201ENST00000262812 IPO9Q96P70 1041 aaKnown RBP19.62■□□□□ 0.73
COPE-201ENST00000262812 BRD9Q9H8M2 597 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms