RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 UGCGQ16739 394 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 INTS6LQ5JSJ4 861 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 TREML2Q5T2D2 321 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ITPRIPL1Q6GPH6 555 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 BBS12Q6ZW61 710 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 SZRD1Q7Z422 152 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MRPL9Q9BYD2 267 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 VPS18Q9P253 973 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 LAMB1P07942 1786 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ERI2A8K979 691 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 NFKBIAP25963 317 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 TBCCQ15814 346 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 HP1BP3Q5SSJ5 553 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 TEKT4Q8WW24 435 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MCUR1Q96AQ8 359 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 TMEM176AQ96HP8 235 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 H3BRJ5 948 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 KIF3CO14782 793 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 FMO1Q01740 532 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MFSD10Q14728 455 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 P3H1Q32P28 736 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ARHGEF18Q6ZSZ5 1173 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 KLC2Q9H0B6 622 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 PABPC3Q9H361 631 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MAP10Q9P2G4 905 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 SLC13A4Q9UKG4 626 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ACTL7BQ9Y614 415 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MAD1L1Q9Y6D9 718 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 A8MXQ7 604 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 RPS6KA5O75582 802 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 GNASQ5JWF2 1037 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MTHFD1LQ6UB35 978 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 LCLAT1Q6UWP7 414 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 PPP2R3CQ969Q6 453 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 VAT1Q99536 393 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 RASSF4Q9H2L5 321 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 MYH2Q9UKX2 1941 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 TXNDC9O14530 226 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ADAMTS3O15072 1205 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 C4BPAP04003 597 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 ITGA4P13612 1032 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 GSCP56915 257 aaPredicted RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 BST2Q10589 180 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 HSDL1Q3SXM5 330 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 CCDC137Q6PK04 289 aaKnown RBP8.63□□□□□ -1.03
PTPN3-201ENST00000262539 PAK5Q9P286 719 aa8.63□□□□□ -1.03
PTPN3-201ENST00000262539 A0A087WZ62 844 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 C6orf222P0C671 652 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 GLIS3Q8NEA6 775 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 OR6B3Q8NGW1 331 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 LMO3Q8TAP4 145 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MGARPQ8TDB4 240 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 SGSM3Q96HU1 749 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 FDXACB1Q9BRP7 624 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 THAP2Q9H0W7 228 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 M0QYV0 167 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 RASGRF2O14827 1237 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 TERF2Q15554 542 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 ATP11CQ8NB49 1132 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 NOA1Q8NC60 698 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 CCNYQ8ND76 341 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 LRRC15Q8TF66 581 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 AENQ8WTP8 325 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 CEP295NLQ96MC4 621 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 LTBP1Q14766 1721 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MBLAC1A4D2B0 266 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 RNF225M0QZC1 329 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 ESRRBO95718 433 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 BCAR1P56945 870 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 KCNA1Q09470 495 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MMS22LQ6ZRQ5 1243 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 C10orf67Q8IYJ2 551 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MIPOL1Q8TD10 442 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 NKD2Q969F2 451 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 GDF3Q9NR23 364 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 DPP3Q9NY33 737 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 SIGLEC16A6NMB1 481 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 RNF40O75150 1001 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 STBD1O95210 358 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 PGK2P07205 417 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 ADSSP30520 456 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 KPNA2P52292 529 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 INCA1Q0VD86 236 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 DNAJC3Q13217 504 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 GPAT2Q6NUI2 795 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 RPAINQ86UA6 219 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 LZTR1Q8N653 840 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 WDR48Q8TAF3 677 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 LNX1Q8TBB1 728 aaPredicted RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 GRAMD1AQ96CP6 724 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MTIF3Q9H2K0 278 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 PCDH9Q9HC56 1237 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 SMG5Q9UPR3 1016 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 PIN4Q9Y237 131 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 MOXD2PA6NHM9 499 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 HNRNPCL2B2RXH8 293 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 HNRNPCL1O60812 293 aaKnown RBP8.62□□□□□ -1.03
PTPN3-201ENST00000262539 KRT37O76014 449 aa8.62□□□□□ -1.03
PTPN3-201ENST00000262539 PLEKP08567 350 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms