RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PGK2P07205 417 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 PROZP22891 400 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 ATP5DP30049 168 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 MXD4Q14582 209 aaPredicted RBP23.76■■□□□ 1.39
MCF2L-201ENST00000261963 LBRQ14739 615 aaKnown RBP23.76■■□□□ 1.39
MCF2L-201ENST00000261963 TXNRD3NBQ6F5E7 133 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 DNAJC24Q6P3W2 148 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 VSTM1Q6UX27 236 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 SCARA5Q6ZMJ2 495 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 ZBTB8OSQ8IWT0 167 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 GLIS1Q8NBF1 620 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 TEKT4Q8WW24 435 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 KCNK9Q9NPC2 374 aa23.76■■□□□ 1.39
MCF2L-201ENST00000261963 IRF6O14896 467 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 LIASO43766 372 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 RTN3O95197 1032 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 ASPAP45381 313 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 TFAMQ00059 246 aaKnown RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 PDCD2Q16342 344 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 KAZNQ674X7 775 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 TMEM35BQ8NCS4 154 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 NLGN2Q8NFZ4 835 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 RBM41Q96IZ5 413 aaKnown RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 ZNF668Q96K58 619 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 PTPRHQ9HD43 1115 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 DNPEPQ9ULA0 475 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 TCEA3O75764 348 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 KRT1P04264 644 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 GJB1P08034 283 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 CDH5P33151 784 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 GCLCP48506 637 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 CELF3Q5SZQ8 465 aaKnown RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 LRRC38Q5VT99 294 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 GDAP1Q8TB36 358 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 STK32AQ8WU08 396 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 TGS1Q96RS0 853 aaKnown RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 FHDC1Q9C0D6 1143 aaPredicted RBP23.75■■□□□ 1.39
MCF2L-201ENST00000261963 MLXIPLQ9NP71 852 aa23.75■■□□□ 1.39
MCF2L-201ENST00000261963 SPDYE5A6NIY4 337 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 FOXO6A8MYZ6 492 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 PDHA1P08559 390 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 MGAT5Q09328 741 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 RELL1Q8IUW5 271 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 GALNT15Q8N3T1 639 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 BBOF1Q8ND07 529 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 TRAPPC12Q8WVT3 735 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ASCC2Q9H1I8 757 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ZMYND8Q9ULU4 1186 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-201ENST00000261963 CSADQ9Y600 493 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 A0A0G2JLL6 359 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-201ENST00000261963 B4GALT5O43286 388 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 GAS2O43903 313 aaKnown RBP23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ATP5HO75947 161 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 TRPC3Q13507 836 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ACVR2BQ13705 512 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ZNF699Q32M78 642 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 TSHZ1Q6ZSZ6 1077 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 PRRT2Q7Z6L0 340 aaPredicted RBP23.74■■□□□ 1.39
MCF2L-201ENST00000261963 ZNF518BQ9C0D4 1074 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 PCDHGC3Q9UN70 934 aa23.74■■□□□ 1.39
MCF2L-201ENST00000261963 PEX11AO75192 247 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 CETPP11597 493 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 ATF7P17544 494 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-201ENST00000261963 LMNB2Q03252 620 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 SURF1Q15526 300 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 P3H1Q32P28 736 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 CYP4A22Q5TCH4 519 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 EEF1DP3Q658K8 133 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 DCUN1D2Q6PH85 259 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 MPZL3Q6UWV2 235 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 SPOCD1Q6ZMY3 1216 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 GSTA5Q7RTV2 222 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 PLPPR4Q7Z2D5 763 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 ECHDC2Q86YB7 292 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 RHPN2Q8IUC4 686 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 THNSL1Q8IYQ7 743 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 ACSF2Q96CM8 615 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-201ENST00000261963 TXNRD2Q9NNW7 524 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 PAPPA2Q9BXP8 1791 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 ADM5C9JUS6 153 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 TPBGLP0DKB5 382 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 CETN2P41208 172 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 SLC5A9Q2M3M2 681 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 DRICH1Q6PGQ1 229 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-201ENST00000261963 CDR2LQ86X02 465 aaPredicted RBP23.73■■□□□ 1.39
MCF2L-201ENST00000261963 AGGF1Q8N302 714 aaeCLIP23.73■■□□□ 1.39
MCF2L-201ENST00000261963 ZFAND2BQ8WV99 257 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 LRMDAQ9H2I8 198 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 FZD8Q9H461 694 aa23.73■■□□□ 1.39
MCF2L-201ENST00000261963 EIF4BP23588 611 aaKnown RBP23.72■■□□□ 1.39
MCF2L-201ENST00000261963 STX2P32856 288 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 TUBP50607 506 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 OSTNP61366 133 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 CGB2Q6NT52 195 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 CYP4X1Q8N118 509 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ANKLE1Q8NAG6 615 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 GRAMD1AQ96CP6 724 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 C9orf72Q96LT7 481 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 C2orf40Q9H1Z8 148 aa23.72■■□□□ 1.39
MCF2L-201ENST00000261963 ELP3Q9H9T3 547 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms