RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 TTC16Q8NEE8 873 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TTC8Q8TAM2 541 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 DEPDC1BQ8WUY9 529 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 PRPF31Q8WWY3 499 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 ATP2A3Q93084 1043 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SLITRK1Q96PX8 696 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 THTPAQ9BU02 230 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TEX13BQ9BXU2 312 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 DEFB129Q9H1M3 183 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 C17orf75Q9HAS0 396 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 A1CFQ9NQ94 594 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 FBXO6Q9NRD1 293 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 DONSONQ9NYP3 566 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 HESX1Q9UBX0 185 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZC3H7BQ9UGR2 993 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 SCOCQ9UIL1 159 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZNRF3Q9ULT6 936 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ADGRA3Q8IWK6 1321 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 COL14A1Q05707 1796 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 A6NJR5 290 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NVLO15381 856 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 DHX15O43143 795 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 PEX10O60683 326 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ZWINTO95229 277 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 OATP04181 439 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 FDX1P10109 184 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ELK3P41970 407 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SPDYE2Q495Y8 402 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 NBPF12Q5TAG4 269 aaPredicted RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 PPP1R2P3Q6NXS1 205 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TMEM154Q6P9G4 183 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 CRLF3Q8IUI8 442 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SULF1Q8IWU6 871 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 C12orf56Q8IXR9 622 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 ASAP3Q8TDY4 903 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 CD101Q93033 1021 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TSC22D3Q99576 134 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SYT11Q9BT88 431 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TMEM109Q9BVC6 243 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 TXLNGYQ9BZA5 131 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 FOXP3Q9BZS1 431 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 KLC2Q9H0B6 622 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 SLC38A10Q9HBR0 1119 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 APOBEC3GQ9HC16 384 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 PRM3Q9NNZ6 103 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 MYOZ2Q9NPC6 264 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 BATF3Q9NR55 127 aa4.97□□□□□ -1.61
USP44-201ENST00000258499 PIH1D1Q9NWS0 290 aaKnown RBP4.97□□□□□ -1.61
USP44-201ENST00000258499 VWA5AO00534 786 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 CST3P01034 146 aaPredicted RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 GLRA2P23416 452 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 HSD17B4P51659 736 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 SESN2P58004 480 aaPredicted RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 CNTN2Q02246 1040 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 GAD2Q05329 585 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 CXCL9Q07325 125 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 KLC1Q07866 573 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 THOC5Q13769 683 aaKnown RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 TFDP2Q14188 446 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 PSMD6Q15008 389 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 SGSM1Q2NKQ1 1148 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 STYK1Q6J9G0 422 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 CRELD2Q6UXH1 353 aaPredicted RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 OTOAQ7RTW8 1153 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 SLC25A41Q8N5S1 370 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 PPP4R1Q8TF05 950 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 CLEC4DQ8WXI8 215 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 ZNF516Q92618 1163 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 GPRASP2Q96D09 838 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 MFSD14AQ96MC6 490 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 MPHOSPH6Q99547 160 aaKnown RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 MRIQ9BWK5 157 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 IFT122Q9HBG6 1241 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 SMYD2Q9NRG4 433 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 FAM49BQ9NUQ9 324 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 ASNSD1Q9NWL6 643 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 CPSF2Q9P2I0 782 aaKnown RBP4.96□□□□□ -1.61
USP44-201ENST00000258499 SLC17A7Q9P2U7 560 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 POLIQ9UNA4 740 aa4.96□□□□□ -1.61
USP44-201ENST00000258499 A0A1B0GUL6 1792 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 BCORQ6W2J9 1755 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 MYPNQ86TC9 1320 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 KBTBD13C9JR72 458 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 SPECC1L-ADORA2AF8WAN1 911 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 AVILO75366 819 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 MTA2O94776 668 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 MYCNP04198 464 aaPredicted RBP4.96□□□□□ -1.62
USP44-201ENST00000258499 SUPT20HL2P0C7V6 817 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 UNGP13051 313 aaPredicted RBP4.96□□□□□ -1.62
USP44-201ENST00000258499 FAAP100Q0VG06 881 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 ZNF268Q14587 947 aaPredicted RBP4.96□□□□□ -1.62
USP44-201ENST00000258499 CHI3L2Q15782 390 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 KBTBD12Q3ZCT8 623 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 SUPT20HL1Q3ZLR7 823 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 SLC39A4Q6P5W5 647 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 NPNTQ6UXI9 565 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 BZW1Q7L1Q6 419 aaKnown RBP4.96□□□□□ -1.62
USP44-201ENST00000258499 MON1BQ7L1V2 547 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 VSIG10LQ86VR7 867 aa4.96□□□□□ -1.62
USP44-201ENST00000258499 NDUFAF2Q8N183 169 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms