RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 AMHR2Q16671 573 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 RAB6CQ53S08 254 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 ARMCX2Q7L311 632 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 RELL1Q8IUW5 271 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 ACTL9Q8TC94 416 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 MRRFQ96E11 262 aaKnown RBP17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 RAB6CQ9H0N0 254 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 PDZD7Q9H5P4 517 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 SPON1Q9HCB6 807 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 EURLQ9NYK6 297 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 SAMD15Q9P1V8 674 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 LGALS13Q9UHV8 139 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 AKT3Q9Y243 479 aa17.41■□□□□ 0.38
UBQLN1-201ENST00000257468 CST8O60676 142 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 CDH16O75309 829 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 MICAL2O94851 1124 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 IL18RAPO95256 599 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 LGALS2P05162 132 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 PTPN7P35236 360 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 SCTRP47872 440 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 RNASEH2BQ5TBB1 312 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 LHX5Q9H2C1 402 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 GGT7Q9UJ14 662 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 EXOC1LA0A1B0GW35 172 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 POC1B-GALNT4F8VUJ3 575 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 M0QYV0 167 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 MED7O43513 233 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 POLR2BP30876 1174 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 GJA5P36382 358 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 SLC26A2P50443 739 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 PPIL2Q13356 520 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 ZKSCAN8Q15776 578 aaPredicted RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 ZBED8Q8IZ13 594 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 SLC35B2Q8TB61 432 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 UBA3Q8TBC4 463 aa17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 NKD2Q969F2 451 aaPredicted RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 PRMT7Q9NVM4 692 aaPredicted RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 DRG1Q9Y295 367 aaKnown RBP17.4■□□□□ 0.38
UBQLN1-201ENST00000257468 CCT8L1PA6NM43 557 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 CILPO75339 1184 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 ITGAVP06756 1048 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 ARF4P18085 180 aaPredicted RBP17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 PHKA2P46019 1235 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 NRLP54845 237 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 STAT4Q14765 748 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 SLC10A6Q3KNW5 377 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 SH3PXD2AQ5TCZ1 1133 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 ANKRD22Q5VYY1 191 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 MAP1SQ66K74 1059 aaPredicted RBP17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 POLNQ7Z5Q5 900 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 ANKMY2Q8IV38 441 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 ANKS4BQ8N8V4 417 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 HSPH1Q92598 858 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 KIF9Q9HAQ2 790 aa17.39■□□□□ 0.37
UBQLN1-201ENST00000257468 RASA4BC9J798 803 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 RASA4O43374 803 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 PIAS1O75925 651 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 OSBPP22059 807 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 KDELR1P24390 212 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 NUGGCQ68CJ6 796 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 CCHCR1Q8TD31 782 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 TMEM176AQ96HP8 235 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 PIWIL1Q96J94 861 aaKnown RBP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 CXCL16Q9H2A7 254 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 ACTR5Q9H9F9 607 aaPredicted RBP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 VPS37BQ9H9H4 285 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 HAUS2Q9NVX0 235 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 SPAG7O75391 227 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 CYP3A5P20815 502 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 LACTB2Q53H82 288 aaPredicted RBP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 AFG1LQ8WV93 481 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 MAML1Q92585 1016 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 PRCCQ92733 491 aaPredicted RBP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 HEXIM2Q96MH2 286 aaKnown RBP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 CCDC77Q9BR77 488 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 MROH8Q9H579 483 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 PCDH9Q9HC56 1237 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 SLC40A1Q9NP59 571 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 ABCF3Q9NUQ8 709 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 AGAP1Q9UPQ3 857 aa17.38■□□□□ 0.37
UBQLN1-201ENST00000257468 VGLL3A8MV65 326 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 SNX3O60493 162 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 MIPP30301 263 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 PDIA2Q13087 525 aaKnown RBP17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 ITIH4Q14624 930 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 MORF4L2Q15014 288 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 TAPT1Q6NXT6 567 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 MAMDC4Q6UXC1 1216 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 ILDR2Q71H61 639 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 CKAP2Q8WWK9 683 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 HPDLQ96IR7 371 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 CFAP57Q96MR6 1250 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 PEBP4Q96S96 227 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 NSRP1Q9H0G5 558 aaKnown RBP17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 KDM4CQ9H3R0 1056 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 ZSWIM8A7E2V4 1837 aa17.37■□□□□ 0.37
UBQLN1-201ENST00000257468 GRAP2O75791 330 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms