RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 POTECB2RU33 542 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PGRMC1O00264 195 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SRGAP2O75044 1071 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 GUCA1CO95843 209 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SRGAP2CP0DJJ0 459 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SRGAP2BP0DMP2 458 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PRKAR2AP13861 404 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 RIPPLY1Q0D2K3 151 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 BARGINQ6ZT62 677 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 SRBD1Q8N5C6 995 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 TCEAL3Q969E4 200 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 DNAJC1Q96KC8 554 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 LURAP1Q96LR2 239 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ECSITQ9BQ95 431 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 STARD7Q9NQZ5 370 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 RNF103-CHMP3A0A140T963 221 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 RNF103O00237 685 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 EXOC3O60645 756 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 GPC4O75487 556 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PCCAP05165 728 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 MAPK12P53778 367 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 HSD17B7P56937 341 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PARP6Q2NL67 630 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 WDR44Q5JSH3 913 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF746Q6NUN9 644 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 BEND4Q6ZU67 534 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ULK2Q8IYT8 1036 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ESX1Q8N693 406 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 JADE3Q92613 823 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 PBKQ96KB5 322 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ELOVL6Q9H5J4 265 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ABCG2Q9UNQ0 655 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 ORC6Q9Y5N6 252 aa7.02□□□□□ -1.29
PDGFRA-201ENST00000257290 HEG1Q9ULI3 1381 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 FAM92AA1XBS5 289 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 I3L521 148 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ZBTB5O15062 677 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MYL3P08590 195 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SNAP25P60880 206 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TAP1Q03518 808 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 EMC2Q15006 297 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CPXCR1Q8N123 301 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ASAP3Q8TDY4 903 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 RMND5BQ96G75 393 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC1Q9BTT6 524 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 APPL1Q9UKG1 709 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 DCCP43146 1447 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MAP3K15Q6ZN16 1313 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SPAG6O75602 509 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 HLA-DOAP06340 250 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 GJA1P17302 382 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PRAMEP78395 509 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MYLK3Q32MK0 819 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC6Q86X45 466 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 FNIP1Q8TF40 1166 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 XAGE2Q96GT9 111 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 L3MBTL3Q96JM7 780 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ADAM22Q9P0K1 906 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 HEY1Q9Y5J3 304 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 RTL9Q8NET4 1388 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 KIF20BQ96Q89 1820 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TEX51A0A1B0GUA7 166 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 LZTS3O60299 673 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 BMP15O95972 392 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 BRAFP15056 766 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PLTPP55058 493 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC14Q15048 493 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 DPCR1Q3MIW9 517 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 FAM83BQ5T0W9 1011 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PRUNE1Q86TP1 453 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ESR2Q92731 530 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MYDGFQ969H8 173 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 EYA3Q99504 573 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PRDM5Q9NQX1 630 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TAB2Q9NYJ8 693 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TFCP2L1Q9NZI6 479 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 MYRFQ9Y2G1 1151 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 LRRC10BA6NIK2 292 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SNAP23O00161 211 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PABPC1P11940 636 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 FDPSP14324 419 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CA4P22748 312 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 TCEA1P23193 301 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 PSMA2P25787 234 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 EXOSC10Q01780 885 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ZNF45Q02386 682 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 DPYSQ14117 519 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ALG1LQ6GMV1 187 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CYP4X1Q8N118 509 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SPATA4Q8NEY3 305 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 KCNK16Q96T55 309 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 INTS2Q9H0H0 1204 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ARHGAP23Q9P227 1491 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 SYNDIG1LA6NDD5 238 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 ATMINO43313 823 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 UFL1O94874 794 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 CKBP12277 381 aa7.01□□□□□ -1.29
PDGFRA-201ENST00000257290 RPL35P42766 123 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms