RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 YY1P25490 414 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RAD23BP54727 409 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 NBPF9Q3BBW0 867 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 MOXD1Q6UVY6 613 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RIBC1Q8N443 379 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 C2orf81A6NN90 581 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CHRM3P20309 590 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 GEMIN4P57678 1058 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 VSNL1P62760 191 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 C3orf62Q6ZUJ4 267 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 OOSP2Q86WS3 158 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 C4orf33Q8N1A6 199 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CEP70Q8NHQ1 597 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RANBP17Q9H2T7 1088 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ZNF556Q9HAH1 456 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 TTLL13PA6NNM8 815 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RGL2O15211 777 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CST8O60676 142 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 DDHD2O94830 711 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ASS1P00966 412 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CTCFP49711 727 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 FXR1P51114 621 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 HNRNPH2P55795 449 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 PRKCQQ04759 706 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 WDR49Q8IV35 697 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 PCSK9Q8NBP7 692 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ZNF473Q8WTR7 871 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 USP13Q92995 863 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 DACH2Q96NX9 599 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 YME1L1Q96TA2 773 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 GBA2Q9HCG7 927 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 GPRC5CQ9NQ84 441 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CPA4Q9UI42 421 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 NCOA3Q9Y6Q9 1424 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RSPH10B2B2RC85 870 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 VWA5AO00534 786 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ZC3H11AO75152 810 aaKnown RBP eCLIP9.06□□□□□ -0.965e-10■□□□□ 11.2
PTCD3-201ENST00000254630 RSPH10BP0C881 870 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 PBLDP30039 288 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 PTGER2P43116 358 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 EPHB3P54753 998 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 NCALDP61601 193 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CTXN3Q4LDR2 81 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 SGO1Q5FBB7 561 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 SEPT8Q92599 483 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CMTM5Q96DZ9 223 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 TSC22D3Q99576 134 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 MTFR1LQ9H019 292 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 THAP2Q9H0W7 228 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RIC8BQ9NVN3 520 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 TRMT6Q9UJA5 497 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RNF112Q9ULX5 631 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 PDHXO00330 501 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 OGTO15294 1046 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 SEC24DO94855 1032 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 GYPCP04921 128 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 RPLP2P05387 115 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 CLCN3P51790 818 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 HPCAP84074 193 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 MAP3K10Q02779 954 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 SFSWAPQ12872 951 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 MKRN4PQ13434 485 aaPredicted RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 DMC1Q14565 340 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 EFL1Q7Z2Z2 1120 aaKnown RBP9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ACOT1Q86TX2 421 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 ARRDC4Q8NCT1 418 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 TPCN2Q8NHX9 752 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 FOXP3Q9BZS1 431 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 OLFML3Q9NRN5 406 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 WWOXQ9NZC7 414 aa9.06□□□□□ -0.96
PTCD3-201ENST00000254630 FAM47DPA6NHR8 397 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 NPM3O75607 178 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 URODP06132 367 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SNRPAP09012 282 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 KCNK10P57789 538 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 LRRC74AQ0VAA2 488 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 DNAL1Q4LDG9 190 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 LVRNQ6Q4G3 990 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 FBXO28Q9NVF7 368 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 TMEM161AQ9NX61 479 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 SFMBT1Q9UHJ3 866 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 OXCT1P55809 520 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 PGM5Q15124 567 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CDR2LQ86X02 465 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 USP38Q8NB14 1042 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 HASPINQ8TF76 798 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 PSD3Q9NYI0 1048 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 GGT7Q9UJ14 662 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 VPS9D1Q9Y2B5 631 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 FAM32AQ9Y421 112 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 IL1R1P14778 569 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 LHX1P48742 406 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CSE1LP55060 971 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 CHI3L2Q15782 390 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 ADNPQ9H2P0 1102 aa9.05□□□□□ -0.96
PTCD3-201ENST00000254630 AAR2Q9Y312 384 aaKnown RBP9.05□□□□□ -0.96
PTCD3-201ENST00000254630 IPPQ9Y573 584 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms