RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SNX24Q9Y343 169 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 PTGESO14684 152 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 RAD23BP54727 409 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SEL1L2Q5TEA6 688 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 PMF1Q6P1K2 205 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 C1orf228Q6PIY5 440 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SERINC5Q86VE9 423 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 MCOLN2Q8IZK6 566 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 ZNF710Q8N1W2 664 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 ARGLU1Q9NWB6 273 aaPredicted RBP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 ASIC3Q9UHC3 531 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 TRIP11Q15643 1979 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 TTI1O43156 1089 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 HEXIM1O94992 359 aaKnown RBP12.3□□□□□ -0.44
LIN28A-201ENST00000254231 GCNT1Q02742 428 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 TIGD5Q53EQ6 642 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 LHX8Q68G74 356 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 LRRC8DQ7L1W4 858 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SIX6OS1Q8N1H7 587 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 SLC4A11Q8NBS3 891 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 CYTH4Q9UIA0 394 aa12.3□□□□□ -0.44
LIN28A-201ENST00000254231 AP1G2O75843 785 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 BEST1O76090 585 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 USP17L7P0C7H9 530 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 SRGAP2BP0DMP2 458 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 GRM5P41594 1212 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 ADIGQ0VDE8 80 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 MYBPC2Q14324 1141 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 CLEC16AQ2KHT3 1053 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 MGAT5BQ3V5L5 792 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 DPY19L2P1Q6NXN4 242 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 UBL4BQ8N7F7 174 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.29□□□□□ -0.44
LIN28A-201ENST00000254231 SLITRK6Q9H5Y7 841 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 KRT82Q9NSB4 513 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 ZNF148Q9UQR1 794 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 CLCN6P51797 869 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 PLTPP55058 493 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 SLC8A3P57103 927 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 TAS2R40P59535 323 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 MBTPS1Q14703 1052 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 DCAF4L1Q3SXM0 396 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 SLAIN1Q8ND83 568 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 EMID1Q96A84 441 aaPredicted RBP12.29□□□□□ -0.44
LIN28A-201ENST00000254231 ZNF518BQ9C0D4 1074 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 ASB7Q9H672 318 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 ABCB6Q9NP58 842 aa12.29□□□□□ -0.44
LIN28A-201ENST00000254231 FAM189A1O60320 539 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 RNF8O76064 485 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SLC4A1P02730 911 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 TFE3P19532 575 aaPredicted RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 UBXN11Q5T124 520 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 TTC19Q6DKK2 380 aaPredicted RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 ZC3H3Q8IXZ2 948 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 KCTD6Q8NC69 237 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 PWWP2AQ96N64 755 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SCN1AP35498 2009 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 MYO18AQ92614 2054 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 P4HA2O15460 535 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 DAPK3O43293 454 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 RALAP11233 206 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 CYP2F1P24903 491 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 MMRN1Q13201 1228 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SLC39A12Q504Y0 691 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 PRSS55Q6UWB4 352 aaPredicted RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 C7orf61Q8IZ16 206 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 MSL3Q8N5Y2 521 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SCAMP5Q8TAC9 235 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SNX27Q96L92 541 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 DHX35Q9H5Z1 703 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 MBLAC1A4D2B0 266 aaPredicted RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 MDM4O15151 490 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 XPOTO43592 962 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 TADA3O75528 432 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 ERBB2P04626 1255 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 HNRNPH3P31942 346 aaKnown RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 FAXCQ5TGI0 409 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 NME8Q8N427 588 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SMPD4Q9NXE4 827 aa12.28□□□□□ -0.44
LIN28A-201ENST00000254231 BARX2Q9UMQ3 279 aaPredicted RBP12.28□□□□□ -0.44
LIN28A-201ENST00000254231 SPTBN5Q9NRC6 3674 aaKnown RBP12.27□□□□□ -0.44
LIN28A-201ENST00000254231 ARVCFO00192 962 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 DDHD2O94830 711 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 ENDOD1O94919 500 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 CD48P09326 243 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 TCP1P17987 556 aaKnown RBP12.27□□□□□ -0.44
LIN28A-201ENST00000254231 FLT3P36888 993 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 GPR15P49685 360 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 NOMO3P69849 1222 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 PITX1P78337 314 aaPredicted RBP12.27□□□□□ -0.44
LIN28A-201ENST00000254231 KRT81Q14533 505 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 KCTD16Q68DU8 428 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 MAATS1Q7Z4T9 603 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 SPRED2Q7Z698 418 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 IQCDQ96DY2 449 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 ARFGAP3Q9NP61 516 aa12.27□□□□□ -0.44
LIN28A-201ENST00000254231 STYXL1Q9Y6J8 313 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms