RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 ATG2AQ2TAZ0 1938 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 TSC2P49815 1807 aa10.81□□□□□ -0.68
HMGCL-201ENST00000235958 DOCK6Q96HP0 2047 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SEC24AO95486 1093 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 GLUD1P00367 558 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 CCDC130P13994 396 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 EPCAMP16422 314 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 BDNFP23560 247 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 ELF1P32519 619 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 KRT9P35527 623 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 RBM10P98175 930 aaKnown RBP10.8□□□□□ -0.68
HMGCL-201ENST00000235958 HYAL1Q12794 435 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 CNGA2Q16280 664 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SGO2Q562F6 1265 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SFMBT2Q5VUG0 894 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SLC47A2Q86VL8 602 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 GPIHBP1Q8IV16 184 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 TCEAL8Q8IYN2 117 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 KREMEN2Q8NCW0 462 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SLC2A14Q8TDB8 520 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 C2orf15Q8WU43 125 aaKnown RBP10.8□□□□□ -0.68
HMGCL-201ENST00000235958 GUCD1Q96NT3 240 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 CDCA3Q99618 268 aaPredicted RBP10.8□□□□□ -0.68
HMGCL-201ENST00000235958 ZSWIM1Q9BR11 485 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 MED10Q9BTT4 135 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 RHOBTB2Q9BYZ6 727 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
HMGCL-201ENST00000235958 CRISPLD1Q9H336 500 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 CYP4F11Q9HBI6 524 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 ABI2Q9NYB9 513 aaPredicted RBP10.8□□□□□ -0.68
HMGCL-201ENST00000235958 MAFFQ9ULX9 164 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 SZT2Q5T011 3432 aa10.8□□□□□ -0.68
HMGCL-201ENST00000235958 BRWD1Q9NSI6 2320 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 MTMR11A4FU01 709 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 LRRC53A6NM62 1247 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 PRRG1O14668 218 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 THAP12O43422 761 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 TPM1P09493 284 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 CYP11B1P15538 503 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 FERP16591 822 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 BRD2P25440 801 aaKnown RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ADORA2BP29275 332 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 CDC25BP30305 580 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 GNA15P30679 374 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 SSTR3P32745 418 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 TUFMP49411 452 aaKnown RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ADKP55263 362 aaKnown RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ADAM15Q13444 863 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 KCNC3Q14003 757 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 TRIM14Q14142 442 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 CCDC85BQ15834 202 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ARHGAP17Q68EM7 881 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 LLGL2Q6P1M3 1020 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 LCLAT1Q6UWP7 414 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 C4orf50Q6ZRC1 276 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 TTC9BQ8N6N2 239 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ANKRD52Q8NB46 1076 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 SPC24Q8NBT2 197 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 VN1R2Q8NFZ6 395 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 OR8K1Q8NGG5 319 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 SPPL2BQ8TCT7 592 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 SYN2Q92777 582 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 MYLPFQ96A32 169 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 FUBP3Q96I24 572 aaKnown RBP eCLIP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ZNF518BQ9C0D4 1074 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 ABCB6Q9NP58 842 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 HCFC2Q9Y5Z7 792 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 CDH23Q9H251 3354 aa10.79□□□□□ -0.68
HMGCL-201ENST00000235958 COL4A4P53420 1690 aaPredicted RBP10.79□□□□□ -0.68
HMGCL-201ENST00000235958 PLXNA3P51805 1871 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 AKR1B15C9JRZ8 316 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 O00370 1275 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 LINC01565O15544 149 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 MED7O43513 233 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 SOAT2O75908 522 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 BEST1O76090 585 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 CFHP08603 1231 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 CCDC172P0C7W6 258 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 HAPLN1P10915 354 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 SKILP12757 684 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 CHRNB2P17787 502 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 GRIK1P39086 918 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 MAGEA11P43364 429 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 CACNA2D1P54289 1103 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 GOLGA8FQ08AF8 430 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 GOLGA8DPQ0D2H9 430 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 STILQ15468 1287 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 ASIC2Q16515 512 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 TSR1Q2NL82 804 aaKnown RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 MGAT5BQ3V5L5 792 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 E4F1Q66K89 784 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 VSTM1Q6UX27 236 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 TMEM184AQ6ZMB5 413 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 RTL10Q7L3V2 364 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 NOP9Q86U38 636 aaKnown RBP10.78□□□□□ -0.68
HMGCL-201ENST00000235958 MICALL1Q8N3F8 863 aa10.78□□□□□ -0.68
HMGCL-201ENST00000235958 EFHBQ8N7U6 833 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms