RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 PNMA6AP0CW24 399 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CYP11B1P15538 503 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 ACO1P21399 889 aaKnown RBP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 OR1D2P34982 312 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CYLC1P35663 651 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 FXR1P51114 621 aaKnown RBP eCLIP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 RAD23BP54727 409 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 PLD1Q13393 1074 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 PTPN14Q15678 1187 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 GOLGA7BQ2TAP0 167 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 TRIM72Q6ZMU5 477 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 TAS1R1Q7RTX1 841 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC186Q7Z3E2 898 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 OSTM1Q86WC4 334 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 ELMOD1Q8N336 334 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 MYCBPAPQ8TBZ2 947 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 SPPL3Q8TCT6 385 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 SPPL2BQ8TCT7 592 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 IPO4Q8TEX9 1081 aaKnown RBP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 BAP1Q92560 729 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 MYLPFQ96A32 169 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CYFIP2Q96F07 1278 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 SMARCD1Q96GM5 515 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 PANX2Q96RD6 677 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 SEPT5Q99719 369 aaPredicted RBP13.75□□□□□ -0.21
PHGDH-220ENST00000641570 TTYH3Q9C0H2 523 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 MIS12Q9H081 205 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 DPEP3Q9H4B8 488 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 CHST7Q9NS84 486 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
PHGDH-220ENST00000641570 TRIM66O15016 1216 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 GRM6O15303 877 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 GLUD1P00367 558 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 BRD2P25440 801 aaKnown RBP13.74□□□□□ -0.21
PHGDH-220ENST00000641570 LMO2P25791 158 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 GRIK1P39086 918 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 BCAT1P54687 386 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 VEPH1Q14D04 833 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 SPA17Q15506 151 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 MGAT5BQ3V5L5 792 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 SCARA3Q6AZY7 606 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC149Q6ZUS6 474 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 SLC47A2Q86VL8 602 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 TMTC1Q8IUR5 882 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 SLC4A11Q8NBS3 891 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 TMEM35BQ8NCS4 154 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 LNX1Q8TBB1 728 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-220ENST00000641570 SLC2A14Q8TDB8 520 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 AUTS2Q8WXX7 1259 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 FUBP3Q96I24 572 aaKnown RBP eCLIP13.74□□□□□ -0.21
PHGDH-220ENST00000641570 PGLYRP2Q96PD5 576 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 DNAJC7Q99615 494 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 BAG1Q99933 345 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-220ENST00000641570 ZCWPW1Q9H0M4 648 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 PRO3102Q9H379 93 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 KRT82Q9NSB4 513 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 AIPL1Q9NZN9 384 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 HMGXB4Q9UGU5 601 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 AJAP1Q9UKB5 411 aaPredicted RBP13.74□□□□□ -0.21
PHGDH-220ENST00000641570 GTF3C4Q9UKN8 822 aa13.74□□□□□ -0.21
PHGDH-220ENST00000641570 AP1G2O75843 785 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 OR4Q2P0C623 313 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 CCDC130P13994 396 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 RPL17P18621 184 aaKnown RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 IGFBP6P24592 240 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 ALDH1A3P47895 512 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 TUFMP49411 452 aaKnown RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 ZNF132P52740 706 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 RPL10AP62906 217 aaKnown RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 CDR2Q01850 454 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 TBX2Q13207 712 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 GPR17Q13304 367 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 KIAA0319Q5VV43 1072 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 SCN4BQ8IWT1 228 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 RNF168Q8IYW5 571 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 CRYBG2Q8N1P7 616 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 OR10T2Q8NGX3 314 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 MRPL38Q96DV4 380 aaKnown RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 CDCA3Q99618 268 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 AGPAT1Q99943 283 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 TLE6Q9H808 572 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 CYP4F11Q9HBI6 524 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 DMAP1Q9NPF5 467 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-220ENST00000641570 EHD2Q9NZN4 543 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 TSPAN16Q9UKR8 245 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 MAFFQ9ULX9 164 aa13.73□□□□□ -0.21
PHGDH-220ENST00000641570 MYBPHLA2RUH7 354 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 TEX28O15482 410 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 ARHGEF15O94989 841 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 LSM8O95777 96 aaKnown RBP13.72□□□□□ -0.21
PHGDH-220ENST00000641570 LRG1P02750 347 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 LINC00271P0C7V0 271 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 SKILP12757 684 aa13.72□□□□□ -0.21
PHGDH-220ENST00000641570 DESP17661 470 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms