RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 DNAJC17Q9NVM6 304 aaKnown RBP18.02■□□□□ 0.47
PHGDH-211ENST00000641213 DNPEPQ9ULA0 475 aa18.02■□□□□ 0.47
PHGDH-211ENST00000641213 hCG_1818297A0A087WSY0 165 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 BTBD19C9JJ37 291 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 H3BRB1 525 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 STRNO43815 780 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 CILPO75339 1184 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 SNAI1O95863 264 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-211ENST00000641213 ITGBL1O95965 494 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-211ENST00000641213 KRT3P12035 628 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 PTPN11Q06124 597 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-211ENST00000641213 TFDP3Q5H9I0 405 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 IZUMO3Q5VZ72 239 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 ZNF467Q7Z7K2 595 aaPredicted RBP18.01■□□□□ 0.47
PHGDH-211ENST00000641213 JOSD2Q8TAC2 188 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 PWWP2AQ96N64 755 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 CPXM1Q96SM3 734 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 TUT1Q9H6E5 874 aaKnown RBP18.01■□□□□ 0.47
PHGDH-211ENST00000641213 SLC45A1Q9Y2W3 748 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 SCN1AP35498 2009 aa18.01■□□□□ 0.47
PHGDH-211ENST00000641213 LRRD1A4D1F6 860 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 CETPP11597 493 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 PSMA2P25787 234 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 CDKN2BP42772 138 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 PSMC1P62191 440 aaKnown RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 KYNUQ16719 465 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 LONRF1Q17RB8 773 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ERMARDQ5T6L9 678 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ILDR2Q71H61 639 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 SPATS2Q86XZ4 545 aaKnown RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 NLRP7Q8WX94 980 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 STMN4Q9H169 189 aaPredicted RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 TSPAN1O60635 241 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ERBB2P04626 1255 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 CHN1P15882 459 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 GSCP56915 257 aaPredicted RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 TMEM132DQ14C87 1099 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 KYAT1Q16773 422 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 P3H1Q32P28 736 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 HIBCHQ6NVY1 386 aaPredicted RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 POLNQ7Z5Q5 900 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 XYLT1Q86Y38 959 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ARFGAP1Q8N6T3 406 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 GLIS1Q8NBF1 620 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 TMEM176AQ96HP8 235 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 HPDLQ96IR7 371 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 XPO6Q96QU8 1125 aaKnown RBP18■□□□□ 0.47
PHGDH-211ENST00000641213 SELENOSQ9BQE4 189 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ZNF408Q9H9D4 720 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 CYP3A43Q9HB55 503 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 ZNF148Q9UQR1 794 aa18■□□□□ 0.47
PHGDH-211ENST00000641213 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 GLTPD2A6NH11 291 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 C3orf70A6NLC5 250 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 IRX5P78411 483 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 SLC25A11Q02978 314 aaKnown RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 MKRN3Q13064 507 aaKnown RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 CCL15Q16663 113 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 MARCH8Q5T0T0 291 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 FNIP1Q8TF40 1166 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 NINJ2Q9NZG7 142 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 WDR35Q9P2L0 1181 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 MORF4L1Q9UBU8 362 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 AGAP1Q9UPQ3 857 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 DRG1Q9Y295 367 aaKnown RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 ATXN2Q99700 1313 aaKnown RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 LRCH4O75427 683 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 MICAL2O94851 1124 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 P4HA1P13674 534 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 ZNF268Q14587 947 aaPredicted RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 GRIK4Q16099 956 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 KIAA0319LQ8IZA0 1049 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 ALLCQ8N6M5 410 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 SERPINB12Q96P63 405 aa17.99■□□□□ 0.47
PHGDH-211ENST00000641213 METTL5Q9NRN9 209 aaKnown RBP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.99■□□□□ 0.47
PHGDH-211ENST00000641213 PDCD11Q14690 1871 aaKnown RBP17.98■□□□□ 0.47
PHGDH-211ENST00000641213 A0A1B0GUA9 196 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 SMPD1P17405 629 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 IL1R2P27930 398 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 GABRB2P47870 512 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 GCLCP48506 637 aaPredicted RBP17.98■□□□□ 0.47
PHGDH-211ENST00000641213 GTF2A2P52657 109 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 OASLQ15646 514 aaKnown RBP17.98■□□□□ 0.47
PHGDH-211ENST00000641213 RELL1Q8IUW5 271 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 EMC1Q8N766 993 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 CCHCR1Q8TD31 782 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 IPO4Q8TEX9 1081 aaKnown RBP17.98■□□□□ 0.47
PHGDH-211ENST00000641213 ATXN2LQ8WWM7 1075 aaKnown RBP17.98■□□□□ 0.47
PHGDH-211ENST00000641213 BRI3BPQ8WY22 251 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 ACAP3Q96P50 834 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 SYNCQ9H7C4 482 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 ZWILCHQ9H900 591 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 DPP3Q9NY33 737 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 ITGA11Q9UKX5 1188 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 C2CD2Q9Y426 696 aa17.98■□□□□ 0.47
PHGDH-211ENST00000641213 UNCXA6NJT0 531 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 ZSCAN5DPP0CG00 497 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 MAGEA9P43362 315 aa17.97■□□□□ 0.47
PHGDH-211ENST00000641213 VCPP55072 806 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms