RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 GPR158Q5T848 1215 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 ZNF852Q6ZMS4 543 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 YAF2Q8IY57 180 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 CCDC47Q96A33 483 aaKnown RBP27.03■■□□□ 1.92
VEGFA-230ENST00000640482 NELL2Q99435 816 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 LTB4R2Q9NPC1 389 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 TRPV5Q9NQA5 729 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 GTF3C4Q9UKN8 822 aa27.03■■□□□ 1.92
VEGFA-230ENST00000640482 MRPS17Q9Y2R5 130 aaKnown RBP27.03■■□□□ 1.92
VEGFA-230ENST00000640482 A0A1W2PQ27 194 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 A0A1W2PQ64 194 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 A0A1W2PQD8 194 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 ZNF263O14978 683 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 NBL1P41271 181 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 RPL10AP62906 217 aaKnown RBP27.02■■□□□ 1.92
VEGFA-230ENST00000640482 LIMS2Q7Z4I7 341 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 SPATA2LQ8IUW3 424 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-230ENST00000640482 ARID3BQ8IVW6 561 aaPredicted RBP27.02■■□□□ 1.92
VEGFA-230ENST00000640482 FSIP1Q8NA03 581 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 MMS19Q96T76 1030 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 PKMYT1Q99640 499 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 MKNK1Q9BUB5 465 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 BCO2Q9BYV7 579 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 TASP1Q9H6P5 420 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 ZMYM5Q9UJ78 669 aa27.02■■□□□ 1.92
VEGFA-230ENST00000640482 FAM170BA6NMN3 283 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 PROB1E7EW31 1015 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 DPYSL4O14531 572 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 RPN1P04843 607 aaKnown RBP27.01■■□□□ 1.91
VEGFA-230ENST00000640482 CSH1P0DML2 217 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 CSH2P0DML3 217 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 MAGEA9P43362 315 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 FUBP3Q96I24 572 aaKnown RBP eCLIP27.01■■□□□ 1.91
VEGFA-230ENST00000640482 IL21Q9HBE4 155 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 CDH9Q9ULB4 789 aa27.01■■□□□ 1.91
VEGFA-230ENST00000640482 NCAM2O15394 837 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 KIF20AO95235 890 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 GLULP15104 373 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 CD72P21854 359 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 WARSP23381 471 aaKnown RBP27■■□□□ 1.91
VEGFA-230ENST00000640482 CYP4F8P98187 520 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 TRPC3Q13507 836 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 CFAP221Q4G0U5 840 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 C4orf50Q6ZRC1 276 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 SLC9A9Q8IVB4 645 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 TMEM174Q8WUU8 243 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 KBTBD7Q8WVZ9 684 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 SYT15Q9BQS2 421 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 OBP2AQ9NY56 170 aa27■■□□□ 1.91
VEGFA-230ENST00000640482 NCANO14594 1321 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 MAN2B1O00754 1011 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 PDXKO00764 312 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 LRRN2O75325 713 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 CST3P01034 146 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-230ENST00000640482 CYP2F1P24903 491 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 WEE1P30291 646 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 GPR15P49685 360 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 TNNC1P63316 161 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 MAPRE1Q15691 268 aaKnown RBP26.99■■□□□ 1.91
VEGFA-230ENST00000640482 C1orf210Q8IVY1 113 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 KCTD10Q9H3F6 313 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 DMAC2Q9NW81 257 aa26.99■■□□□ 1.91
VEGFA-230ENST00000640482 UXTQ9UBK9 157 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-230ENST00000640482 MAGED2Q9UNF1 606 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-230ENST00000640482 MTF2Q9Y483 593 aaPredicted RBP26.99■■□□□ 1.91
VEGFA-230ENST00000640482 COL4A3Q01955 1670 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 MYBPHLA2RUH7 354 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 CHADO15335 359 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 HCRTO43612 131 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 GFRA3O60609 400 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 PHACTR2O75167 634 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 HMGA1P17096 107 aaKnown RBP26.98■■□□□ 1.91
VEGFA-230ENST00000640482 DDX6P26196 483 aaKnown RBP eCLIP26.98■■□□□ 1.915e-8■□□□□ 10.5
VEGFA-230ENST00000640482 ATICP31939 592 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 AP3M2P53677 418 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 FCHO2Q0JRZ9 810 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 DDR2Q16832 855 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 FAM171BQ6P995 826 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 KRBA2Q6ZNG9 492 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 CSGALNACT1Q8TDX6 532 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 ZNF516Q92618 1163 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 RSPRY1Q96DX4 576 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 CCDC34Q96HJ3 373 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 GZF1Q9H116 711 aaPredicted RBP26.98■■□□□ 1.91
VEGFA-230ENST00000640482 SNX25Q9H3E2 840 aa26.98■■□□□ 1.91
VEGFA-230ENST00000640482 STAU1O95793 577 aaKnown RBP26.97■■□□□ 1.91
VEGFA-230ENST00000640482 FAM163BP0C2L3 166 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 PRR29P0C7W0 189 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 LMO2P25791 158 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 TARSP26639 723 aaKnown RBP26.97■■□□□ 1.91
VEGFA-230ENST00000640482 NLRP12P59046 1061 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 PSMC1P62191 440 aaKnown RBP26.97■■□□□ 1.91
VEGFA-230ENST00000640482 WDR72Q3MJ13 1102 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 FRMD5Q7Z6J6 570 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 GPIHBP1Q8IV16 184 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 PARD3BQ8TEW8 1205 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 SYAP1Q96A49 352 aaPredicted RBP26.97■■□□□ 1.91
VEGFA-230ENST00000640482 GOLPH3LQ9H4A5 285 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 GDPD2Q9HCC8 539 aa26.97■■□□□ 1.91
VEGFA-230ENST00000640482 MAGEC2Q9UBF1 373 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms