RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 MAPK8IP1Q9UQF2 711 aa19.02■□□□□ 0.64
PNKP-230ENST00000638016 NUP210Q8TEM1 1887 aaPredicted RBP19.02■□□□□ 0.64
PNKP-230ENST00000638016 DMDP11532 3685 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 USP34Q70CQ2 3546 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 VPS13AQ96RL7 3174 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 HEPACAM2A8MVW5 462 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 PRAMEF12O95522 483 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 HMGA1P17096 107 aaKnown RBP19.01■□□□□ 0.63
PNKP-230ENST00000638016 GDI1P31150 447 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 TUFMP49411 452 aaKnown RBP19.01■□□□□ 0.63
PNKP-230ENST00000638016 MYL7Q01449 175 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 DPYDQ12882 1025 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 KRBA2Q6ZNG9 492 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 LIMS2Q7Z4I7 341 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 TMEM150AQ86TG1 271 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 ARID3BQ8IVW6 561 aaPredicted RBP19.01■□□□□ 0.63
PNKP-230ENST00000638016 TMEM86AQ8N2M4 240 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 SCAND2PQ9GZW5 306 aaPredicted RBP19.01■□□□□ 0.63
PNKP-230ENST00000638016 BRD9Q9H8M2 597 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 USP25Q9UHP3 1055 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 SIT1Q9Y3P8 196 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 ASB3Q9Y575 518 aa19.01■□□□□ 0.63
PNKP-230ENST00000638016 PTPRDP23468 1912 aa19■□□□□ 0.63
PNKP-230ENST00000638016 A0A1W2PQ27 194 aa19■□□□□ 0.63
PNKP-230ENST00000638016 A0A1W2PQ64 194 aa19■□□□□ 0.63
PNKP-230ENST00000638016 A0A1W2PQD8 194 aa19■□□□□ 0.63
PNKP-230ENST00000638016 LRRIQ3A6PVS8 624 aaPredicted RBP19■□□□□ 0.63
PNKP-230ENST00000638016 PDGFRBP09619 1106 aa19■□□□□ 0.63
PNKP-230ENST00000638016 NUBP1P53384 320 aa19■□□□□ 0.63
PNKP-230ENST00000638016 MYL6P60660 151 aa19■□□□□ 0.63
PNKP-230ENST00000638016 SNRPFP62306 86 aaKnown RBP19■□□□□ 0.63
PNKP-230ENST00000638016 DLG4P78352 724 aa19■□□□□ 0.63
PNKP-230ENST00000638016 MYO1EQ12965 1108 aa19■□□□□ 0.63
PNKP-230ENST00000638016 UBXN2BQ14CS0 331 aa19■□□□□ 0.63
PNKP-230ENST00000638016 VEPH1Q14D04 833 aa19■□□□□ 0.63
PNKP-230ENST00000638016 ANGPT1Q15389 498 aa19■□□□□ 0.63
PNKP-230ENST00000638016 ITIH5Q86UX2 942 aa19■□□□□ 0.63
PNKP-230ENST00000638016 C2orf15Q8WU43 125 aaKnown RBP19■□□□□ 0.63
PNKP-230ENST00000638016 MMS19Q96T76 1030 aa19■□□□□ 0.63
PNKP-230ENST00000638016 SYT15Q9BQS2 421 aa19■□□□□ 0.63
PNKP-230ENST00000638016 DDX23Q9BUQ8 820 aaKnown RBP19■□□□□ 0.63
PNKP-230ENST00000638016 TRMT61BQ9BVS5 477 aaKnown RBP19■□□□□ 0.63
PNKP-230ENST00000638016 CRTAC1Q9NQ79 661 aa19■□□□□ 0.63
PNKP-230ENST00000638016 DMAC2Q9NW81 257 aa19■□□□□ 0.63
PNKP-230ENST00000638016 MAGED2Q9UNF1 606 aaPredicted RBP19■□□□□ 0.63
PNKP-230ENST00000638016 R3HCC1Q9Y3T6 440 aaKnown RBP19■□□□□ 0.63
PNKP-230ENST00000638016 ATP6V1DQ9Y5K8 247 aa19■□□□□ 0.63
PNKP-230ENST00000638016 KANSL1LA0AUZ9 987 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 ZNF202O95125 648 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 NR3C1P04150 777 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 PSMC3P17980 439 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 TARSP26639 723 aaKnown RBP18.99■□□□□ 0.63
PNKP-230ENST00000638016 PFKPQ01813 784 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 TDRD10Q5VZ19 366 aaKnown RBP18.99■□□□□ 0.63
PNKP-230ENST00000638016 MYLPFQ96A32 169 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 ZFYVE19Q96K21 471 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 XYLT2Q9H1B5 865 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 TRPV4Q9HBA0 871 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 LTB4R2Q9NPC1 389 aa18.99■□□□□ 0.63
PNKP-230ENST00000638016 ZNF638Q14966 1978 aaKnown RBP18.99■□□□□ 0.63
PNKP-230ENST00000638016 GREB1Q4ZG55 1949 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 TADA3O75528 432 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 WARSP23381 471 aaKnown RBP18.98■□□□□ 0.63
PNKP-230ENST00000638016 LHX1P48742 406 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 PRKCQQ04759 706 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 SMARCB1Q12824 385 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 PSMD2Q13200 908 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 BECN1Q14457 450 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 NFE2Q16621 373 aaPredicted RBP18.98■□□□□ 0.63
PNKP-230ENST00000638016 FAM171BQ6P995 826 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 SMYD4Q8IYR2 804 aaPredicted RBP18.98■□□□□ 0.63
PNKP-230ENST00000638016 PARD3BQ8TEW8 1205 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 SLC46A2Q9BY10 475 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 DPEP3Q9H4B8 488 aa18.98■□□□□ 0.63
PNKP-230ENST00000638016 CGNQ9P2M7 1197 aaKnown RBP18.98■□□□□ 0.63
PNKP-230ENST00000638016 KIF26AQ9ULI4 1882 aaPredicted RBP18.98■□□□□ 0.63
PNKP-230ENST00000638016 PATJQ8NI35 1801 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 ZFHX2Q9C0A1 2572 aaPredicted RBP18.97■□□□□ 0.63
PNKP-230ENST00000638016 FAM170BA6NMN3 283 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 ARNTLO00327 626 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 RHOBTB3O94955 611 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 VNN1O95497 513 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 F11P03951 625 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 PCSK1P29120 753 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 RAP1GAPP47736 663 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 SOX9P48436 509 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 NLRP12P59046 1061 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 BIRC3Q13489 604 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 TAF12Q16514 161 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 WDR72Q3MJ13 1102 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 CEP135Q66GS9 1140 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 FRMD5Q7Z6J6 570 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 SPATA2LQ8IUW3 424 aaPredicted RBP18.97■□□□□ 0.63
PNKP-230ENST00000638016 MFSD6LQ8IWD5 586 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 SCN4BQ8IWT1 228 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 TTC8Q8TAM2 541 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 RIN3Q8TB24 985 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 GOLGA5Q8TBA6 731 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 DEPDC1BQ8WUY9 529 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 ERCC4Q92889 916 aaPredicted RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms