RNA–Protein interactions for RNA: ENST00000637941.1

TCF4-289, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 2,115 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-289ENST00000637941 PHTF1Q9UMS5 762 aa13.41□□□□□ -0.26
TCF4-289ENST00000637941 ATP4AP20648 1035 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 CA4P22748 312 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 FOXN2P32314 431 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 WDR4P57081 412 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 PDIA2Q13087 525 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 SEPT7Q16181 437 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 PARP6Q2NL67 630 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 WDR78Q5VTH9 848 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 FYB2Q5VWT5 728 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 CGB2Q6NT52 195 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 GPAT2Q6NUI2 795 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 CATSPERGQ6ZRH7 1159 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ECHDC2Q86YB7 292 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ZBTB8OSQ8IWT0 167 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 AGGF1Q8N302 714 aaeCLIP13.4□□□□□ -0.26
TCF4-289ENST00000637941 SLC35B2Q8TB61 432 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 FNIP1Q8TF40 1166 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 PRCCQ92733 491 aaPredicted RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 N4BP2L2Q92802 583 aaPredicted RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 ALKBH8Q96BT7 664 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 C2orf40Q9H1Z8 148 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 CISHQ9NSE2 258 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 GGT7Q9UJ14 662 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 HACL1Q9UJ83 578 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 F8VP50 259 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 OGTO15294 1046 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 HNRNPCL1O60812 293 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 BRD2P25440 801 aaKnown RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 GCAP28676 217 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 SSTR3P32745 418 aaPredicted RBP13.4□□□□□ -0.26
TCF4-289ENST00000637941 HMGCS2P54868 508 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ZNF252P-AS1Q0IIN9 211 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 CAPSQ13938 189 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 EFHC2Q5JST6 749 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ZBTB41Q5SVQ8 909 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 IER5Q5VY09 327 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 VSIG1Q86XK7 387 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 PLCD3Q8N3E9 789 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ZNF398Q8TD17 642 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 INPP5DQ92835 1189 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 FAXDC2Q96IV6 333 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 RMDN2Q96LZ7 410 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 LRRC37BQ96QE4 947 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 TCHPQ9BT92 498 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 LCTP09848 1927 aa13.4□□□□□ -0.26
TCF4-289ENST00000637941 FOXO6A8MYZ6 492 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 SPAG7O75391 227 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 MAFO75444 373 aaPredicted RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 TNNC2P02585 160 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 HARSP12081 509 aaKnown RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 PSMA2P25787 234 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 SLC8A3P57103 927 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 MXD4Q14582 209 aaPredicted RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 TARBP2Q15633 366 aaKnown RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 PKN2Q16513 984 aaKnown RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 ATP13A4Q4VNC1 1196 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 SEPT14Q6ZU15 432 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 FAM47EQ6ZV65 393 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 RSAD2Q8WXG1 361 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 WRNIP1Q96S55 665 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 LHX5Q9H2C1 402 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 SIGLEC16A6NMB1 481 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 TM9SF1O15321 606 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 IFNB1P01574 187 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 KRT16P08779 473 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 ZSCAN5DPP0CG00 497 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 RNASELQ05823 741 aaKnown RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 ACAP1Q15027 740 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 ZNF699Q32M78 642 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 NBPF12Q5TAG4 269 aaPredicted RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 BBS12Q6ZW61 710 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 PRUNE1Q86TP1 453 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 AGAP11Q8TF27 550 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 ANKRD36BP1Q96IX9 119 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 L3MBTL3Q96JM7 780 aaPredicted RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 TMEM237Q96Q45 408 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 MTMR12Q9C0I1 747 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 LRMDAQ9H2I8 198 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 ETNK1Q9HBU6 452 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 PNMA3Q9UL41 463 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 STK38LQ9Y2H1 464 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 C15orf41Q9Y2V0 281 aa13.39□□□□□ -0.27
TCF4-289ENST00000637941 FARP1Q9Y4F1 1045 aaPredicted RBP13.39□□□□□ -0.27
TCF4-289ENST00000637941 TROVE2P10155 538 aaKnown RBP eCLIP13.38□□□□□ -0.27
TCF4-289ENST00000637941 STAT5BP51692 787 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 MYL6P60660 151 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 SP2Q02086 613 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 PDE4CQ08493 712 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 DNAJC3Q13217 504 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 MOGSQ13724 837 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 WDR72Q3MJ13 1102 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 CDCA2Q69YH5 1023 aaPredicted RBP13.38□□□□□ -0.27
TCF4-289ENST00000637941 GLIS1Q8NBF1 620 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 NLGN2Q8NFZ4 835 aa13.38□□□□□ -0.27
TCF4-289ENST00000637941 TMEM121Q9BTD3 319 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms