RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 GAREM2Q75VX8 874 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 SPATA2LQ8IUW3 424 aaPredicted RBP19.58■□□□□ 0.72
CLN6-210ENST00000635747 MFSD6LQ8IWD5 586 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 SYAP1Q96A49 352 aaPredicted RBP19.58■□□□□ 0.72
CLN6-210ENST00000635747 LPIN3Q9BQK8 851 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 PI4K2AQ9BTU6 479 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 OSBPL6Q9BZF3 934 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 KCTD10Q9H3F6 313 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 ZNF334Q9HCZ1 680 aaPredicted RBP19.58■□□□□ 0.72
CLN6-210ENST00000635747 GTF3C4Q9UKN8 822 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 CDH9Q9ULB4 789 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 TCHHQ07283 1943 aa19.58■□□□□ 0.72
CLN6-210ENST00000635747 H0Y858 1186 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 CALUO43852 315 aaPredicted RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 PHACTR2O75167 634 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 CST3P01034 146 aaPredicted RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 WARSP23381 471 aaKnown RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 ACAT1P24752 427 aaKnown RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 WEE1P30291 646 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 TNNC1P63316 161 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 DPYDQ12882 1025 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 KCNB1Q14721 858 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 CFAP221Q4G0U5 840 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 VITQ6UXI7 678 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 C4orf50Q6ZRC1 276 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 PJA1Q8NG27 643 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 PARD3BQ8TEW8 1205 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 GIPC2Q8TF65 315 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 PKMYT1Q99640 499 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 DDX23Q9BUQ8 820 aaKnown RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 TASP1Q9H6P5 420 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 TMLHEQ9NVH6 421 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 UXTQ9UBK9 157 aaPredicted RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 FRMD4BQ9Y2L6 1034 aa19.57■□□□□ 0.72
CLN6-210ENST00000635747 MRPS17Q9Y2R5 130 aaKnown RBP19.57■□□□□ 0.72
CLN6-210ENST00000635747 HEPACAM2A8MVW5 462 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 NRG2O14511 850 aaPredicted RBP19.56■□□□□ 0.72
CLN6-210ENST00000635747 DPYSL4O14531 572 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 ZNF263O14978 683 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 NCAM2O15394 837 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 TACC1O75410 805 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 NR3C1P04150 777 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 MRE11P49959 708 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 CLDN10P78369 228 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 WDR72Q3MJ13 1102 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 GPR158Q5T848 1215 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 FAM171BQ6P995 826 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 ALYREFQ86V81 257 aaKnown RBP19.56■□□□□ 0.72
CLN6-210ENST00000635747 OSTM1Q86WC4 334 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 ARID3BQ8IVW6 561 aaPredicted RBP19.56■□□□□ 0.72
CLN6-210ENST00000635747 YAF2Q8IY57 180 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 ZNF516Q92618 1163 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 SNX25Q9H3E2 840 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 GOLPH3LQ9H4A5 285 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 GDPD2Q9HCC8 539 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 OBP2AQ9NY56 170 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 TRAF3IP3Q9Y228 551 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 CACNA1HO95180 2353 aa19.56■□□□□ 0.72
CLN6-210ENST00000635747 SOBPA7XYQ1 873 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 MAN2B1O00754 1011 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 GLULP15104 373 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 DDX6P26196 483 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLN6-210ENST00000635747 GDI1P31150 447 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 GNL1P36915 607 aaPredicted RBP19.55■□□□□ 0.72
CLN6-210ENST00000635747 VIPR2P41587 438 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 MAGEA9P43362 315 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 MAGEA11P43364 429 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 BIRC3Q13489 604 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 GRM2Q14416 872 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 NFIL3Q16649 462 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 ZNF852Q6ZMS4 543 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 TMC2Q8TDI7 906 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 KBTBD7Q8WVZ9 684 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 CEP295NLQ96MC4 621 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 SYT15Q9BQS2 421 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 VRTNQ9H8Y1 702 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 IL21Q9HBE4 155 aa19.55■□□□□ 0.72
CLN6-210ENST00000635747 MAGEC2Q9UBF1 373 aaPredicted RBP19.55■□□□□ 0.72
CLN6-210ENST00000635747 MYBPHLA2RUH7 354 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 IKBKBO14920 756 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 MAPK13O15264 365 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 DCNP07585 359 aaKnown RBP19.54■□□□□ 0.72
CLN6-210ENST00000635747 PRR29P0C7W0 189 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 CYP2F1P24903 491 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 LMO2P25791 158 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 RPL13P26373 211 aaKnown RBP19.54■□□□□ 0.72
CLN6-210ENST00000635747 CDR1P51861 262 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 MLLT6P55198 1093 aaPredicted RBP19.54■□□□□ 0.72
CLN6-210ENST00000635747 VSTM1Q6UX27 236 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 TPRG1Q6ZUI0 275 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 GUF1Q8N442 669 aaKnown RBP19.54■□□□□ 0.72
CLN6-210ENST00000635747 BCO2Q9BYV7 579 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 FOXQ1Q9C009 403 aa19.54■□□□□ 0.72
CLN6-210ENST00000635747 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
CLN6-210ENST00000635747 FAM170BA6NMN3 283 aa19.53■□□□□ 0.72
CLN6-210ENST00000635747 LRRIQ3A6PVS8 624 aaPredicted RBP19.53■□□□□ 0.72
CLN6-210ENST00000635747 CHADO15335 359 aa19.53■□□□□ 0.72
CLN6-210ENST00000635747 HMGA1P17096 107 aaKnown RBP19.53■□□□□ 0.72
CLN6-210ENST00000635747 CASP4P49662 377 aa19.53■□□□□ 0.72
CLN6-210ENST00000635747 NLRP12P59046 1061 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms