RNA–Protein interactions for RNA: ENST00000635325.1

UBASH3A-209, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

TSL 1 (best)

Gene UBASH3A, Length 2,095 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-209ENST00000635325 TRMT10CQ7L0Y3 403 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ARFGAP1Q8N6T3 406 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 PPP1R13LQ8WUF5 828 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 RBM41Q96IZ5 413 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 FAM107BQ9H098 131 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 CXCL16Q9H2A7 254 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 LHX5Q9H2C1 402 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 TUT1Q9H6E5 874 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 FEZ2Q9UHY8 353 aaPredicted RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ANAPC5Q9UJX4 755 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 LRRD1A4D1F6 860 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 RGS16O15492 202 aaPredicted RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 LIASO43766 372 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 CILPO75339 1184 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ERBB2P04626 1255 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 PSMC4P43686 418 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 TNFAIP2Q03169 654 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 PIGHQ14442 188 aaPredicted RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ZNF365Q70YC5 407 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 KIAA0319LQ8IZA0 1049 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 EMC1Q8N766 993 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 NIPA2Q8N8Q9 360 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ZNF473Q8WTR7 871 aaKnown RBP13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 HAUS1Q96CS2 278 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 HHIPL1Q96JK4 782 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 TMEM109Q9BVC6 243 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 TRAIPQ9BWF2 469 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
UBASH3A-209ENST00000635325 ZSWIM8A7E2V4 1837 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 hCG_1818297A0A087WSY0 165 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 TRAPPC3O43617 180 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 FAM107AO95990 144 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 PAEPP09466 180 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 ZSCAN5DPP0CG00 497 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 KRT3P12035 628 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 PSMA2P25787 234 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 IL1R2P27930 398 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 CDKN2BP42772 138 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 PSMC1P62191 440 aaKnown RBP13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 TAP1Q03518 808 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 PTPN11Q06124 597 aaPredicted RBP13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 SLC20A2Q08357 652 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 AUHQ13825 339 aaKnown RBP13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 TMEM132DQ14C87 1099 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 GRIK4Q16099 956 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 KYNUQ16719 465 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 LONRF1Q17RB8 773 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 SMTNL2Q2TAL5 461 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 IZUMO3Q5VZ72 239 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 GSTA5Q7RTV2 222 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 GPR142Q7Z601 462 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 XYLT1Q86Y38 959 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 PLCD3Q8N3E9 789 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 HPDLQ96IR7 371 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 STRIP2Q9ULQ0 834 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 AGAP1Q9UPQ3 857 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 COL1A2P08123 1366 aa13.13□□□□□ -0.31
UBASH3A-209ENST00000635325 C3orf70A6NLC5 250 aaPredicted RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 SIGLEC16A6NMB1 481 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 RASGRF2O14827 1237 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 MED7O43513 233 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 LRCH4O75427 683 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TOMM70O94826 608 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 MICAL2O94851 1124 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TJP3O95049 919 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 MMP13P45452 471 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 SLC25A11Q02978 314 aaKnown RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TMEM62Q0P6H9 643 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 P3H1Q32P28 736 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 KCNT1Q5JUK3 1230 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 C6orf118Q5T5N4 469 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 ZNF467Q7Z7K2 595 aaPredicted RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 DPP9Q86TI2 863 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 CCDC89Q8N998 374 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 MAML3Q96JK9 1138 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 ASB7Q9H672 318 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 ZWILCHQ9H900 591 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 FAM169AQ9Y6X4 670 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 GMNCA6NCL1 334 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TMEM88BA6NKF7 163 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 VGLL3A8MV65 326 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 FAM155AB1AL88 458 aaPredicted RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 IGF2BP3O00425 579 aaKnown RBP eCLIP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 STRNO43815 780 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 ECM2O94769 699 aaPredicted RBP13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TTC4O95801 387 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 MMP3P08254 477 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 ETS1P14921 441 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 CETN2P41208 172 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 CORO7P57737 925 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 INHBEP58166 350 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 FAM110CQ1W6H9 321 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 KIZQ2M2Z5 673 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 CCDC38Q502W7 563 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TNFAIP8L3Q5GJ75 292 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 TFDP3Q5H9I0 405 aa13.12□□□□□ -0.31
UBASH3A-209ENST00000635325 DPH6Q7L8W6 267 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms