RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 TDRD10Q5VZ19 366 aaKnown RBP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 AGGF1Q8N302 714 aaeCLIP13.35□□□□□ -0.27
SCN8A-209ENST00000627620 GPRC5CQ9NQ84 441 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 PKD2L2Q9NZM6 624 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
SCN8A-209ENST00000627620 RSPH10B2B2RC85 870 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MAN1A2O60476 641 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MED24O75448 989 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ARIH2O95376 493 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 RSPH10BP0C881 870 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 CYP2C8P10632 490 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ARHGAP18Q8N392 663 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 TPCN2Q8NHX9 752 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SYNDIG1Q9H7V2 258 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SELENONQ9NZV5 590 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MTO1Q9Y2Z2 717 aaKnown RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SPATA31A5Q5VU36 1347 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SPATA31A7Q8IWB4 1347 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 M0QYT0 321 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MUTP22033 750 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 LRRC36Q1X8D7 754 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MMGT1Q8N4V1 131 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 L3MBTL3Q96JM7 780 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MYO1GB0I1T2 1018 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SOX11P35716 441 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ARL4DP49703 201 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MED21Q13503 144 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SLC13A5Q86YT5 568 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 RIBC1Q8N443 379 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 STAMBPL1Q96FJ0 436 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ABHD8Q96I13 439 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SEC16BQ96JE7 1060 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 OGTO15294 1046 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 RHOBTB1O94844 696 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 PON1P27169 355 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MAPRE1Q15691 268 aaKnown RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ENGASEQ8NFI3 743 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 PRMT6Q96LA8 375 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 GLT1D1Q96MS3 346 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 WDCPQ9H6R7 721 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 PSD3Q9NYI0 1048 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 FKBP9O95302 570 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 SGPL1O95470 568 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 KRT16P08779 473 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 THPOP40225 353 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ATXN3P54252 364 aaPredicted RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 ORC1Q13415 861 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 RNF180Q86T96 592 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 CLEC4FQ8N1N0 589 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 NOA1Q8NC60 698 aaKnown RBP13.34□□□□□ -0.27
SCN8A-209ENST00000627620 B4GALNT2Q8NHY0 566 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 E2F7Q96AV8 911 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 THTPAQ9BU02 230 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 VPS33BQ9H267 617 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 MANSC1Q9H8J5 431 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 DOLKQ9UPQ8 538 aa13.34□□□□□ -0.27
SCN8A-209ENST00000627620 C2CD2LO14523 706 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 EFCAB14O75071 495 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CDH2P19022 906 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 GEMIN4P57678 1058 aaKnown RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 SLC29A2Q14542 456 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 LINC00523Q86TU6 105 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CBWD2Q8IUF1 395 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CMTM5Q96DZ9 223 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CINPQ9BW66 212 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 ZCWPW1Q9H0M4 648 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 FOXN3O00409 490 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CLASP2O75122 1294 aaKnown RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 SGO1Q5FBB7 561 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 STX19Q8N4C7 294 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 ATP6V0D2Q8N8Y2 350 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CERKQ8TCT0 537 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 SREBF2Q12772 1141 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CHI3L2Q15782 390 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 EME1Q96AY2 570 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 MTMR12Q9C0I1 747 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 UBE2Q2LH0YL09 131 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 PMPCBO75439 489 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 ANXA9O76027 345 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CTCFP49711 727 aaPredicted RBP13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CARD9Q9H257 536 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CDY2AQ9Y6F7 541 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 CDY1Q9Y6F8 540 aa13.33□□□□□ -0.28
SCN8A-209ENST00000627620 H0Y626 953 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ARP10275 920 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 TCN1P20061 433 aaPredicted RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ACO1P21399 889 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 LSP1P33241 339 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 ALDH7A1P49419 539 aaKnown RBP13.32□□□□□ -0.28
SCN8A-209ENST00000627620 BLVRAP53004 296 aa13.32□□□□□ -0.28
SCN8A-209ENST00000627620 POLLQ9UGP5 575 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms