RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ABCB6Q9NP58 842 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 LTB4R2Q9NPC1 389 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 GTF3C4Q9UKN8 822 aa11.63□□□□□ -0.55
SSBP4-215ENST00000625926 MTF2Q9Y483 593 aaPredicted RBP11.63□□□□□ -0.55
SSBP4-215ENST00000625926 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 DPYSL4O14531 572 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 LRRN2O75325 713 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 CST3P01034 146 aaPredicted RBP11.62□□□□□ -0.55
SSBP4-215ENST00000625926 CSH1P0DML2 217 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 CSH2P0DML3 217 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 GLULP15104 373 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 WEE1P30291 646 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 SYKP43405 635 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 STXBP5Q5T5C0 1151 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 LIMS2Q7Z4I7 341 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 OSTM1Q86WC4 334 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 SPATA2LQ8IUW3 424 aaPredicted RBP11.62□□□□□ -0.55
SSBP4-215ENST00000625926 C1orf210Q8IVY1 113 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 MMS19Q96T76 1030 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 PKMYT1Q99640 499 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 MKNK1Q9BUB5 465 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 IL21Q9HBE4 155 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 ZMYM5Q9UJ78 669 aa11.62□□□□□ -0.55
SSBP4-215ENST00000625926 ZNF318Q5VUA4 2279 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 VWA8A3KMH1 1905 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FAM237AA0A1B0GTK4 181 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 A0A1W2PQ27 194 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 A0A1W2PQ64 194 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 A0A1W2PQD8 194 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 MYBPHLA2RUH7 354 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 PDXKO00764 312 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CHADO15335 359 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 GFRA3O60609 400 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 KIF20AO95235 890 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 RPN1P04843 607 aaKnown RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FAM163BP0C2L3 166 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 HMGA1P17096 107 aaKnown RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CYP2F1P24903 491 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 LMO2P25791 158 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 MAGEA9P43362 315 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 NDUFA8P51970 172 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 AP3M2P53677 418 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 MLLT6P55198 1093 aaPredicted RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CYP4F8P98187 520 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FCHO2Q0JRZ9 810 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 TRPC3Q13507 836 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 BECN1Q14457 450 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 MAPRE1Q15691 268 aaKnown RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 DDR2Q16832 855 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CFAP221Q4G0U5 840 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FAM171BQ6P995 826 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 C4orf50Q6ZRC1 276 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FRMD5Q7Z6J6 570 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 GPIHBP1Q8IV16 184 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 KIAA0895Q8NCT3 520 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CSGALNACT1Q8TDX6 532 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 TMEM174Q8WUU8 243 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 ZNF516Q92618 1163 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 NKD2Q969F2 451 aaPredicted RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CCDC47Q96A33 483 aaKnown RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 RSPRY1Q96DX4 576 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 FUBP3Q96I24 572 aaKnown RBP eCLIP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 SLC46A2Q9BY10 475 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 OBP2AQ9NY56 170 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 CDH9Q9ULB4 789 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 MAGED2Q9UNF1 606 aaPredicted RBP11.61□□□□□ -0.55
SSBP4-215ENST00000625926 PIAS3Q9Y6X2 628 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 ZFHX4Q86UP3 3567 aa11.61□□□□□ -0.55
SSBP4-215ENST00000625926 SHISA7A6NL88 538 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 SOBPA7XYQ1 873 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 HCRTO43612 131 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 PHACTR2O75167 634 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 ATP2C2O75185 946 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 TACC1O75410 805 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 STAU1O95793 577 aaKnown RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 F11P03951 625 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 PDGFRBP09619 1106 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 WARSP23381 471 aaKnown RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 ATICP31939 592 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 GNL1P36915 607 aaPredicted RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 GPR15P49685 360 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 NLRP12P59046 1061 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 TNNC1P63316 161 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 WDR72Q3MJ13 1102 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 ARHGAP29Q52LW3 1261 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 SDHAF4Q5VUM1 108 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 SLC9A9Q8IVB4 645 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 CMTM8Q8IZV2 173 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 CELF5Q8N6W0 485 aaKnown RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 FSIP1Q8NA03 581 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 FAM3CQ92520 227 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 CLDN23Q96B33 292 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 LRRC3BQ96PB8 259 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 SYT15Q9BQS2 421 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 SNX25Q9H3E2 840 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 KCTD10Q9H3F6 313 aa11.6□□□□□ -0.55
SSBP4-215ENST00000625926 DMAC2Q9NW81 257 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms