RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 ACAP3Q96P50 834 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 GCNAQ96QF7 691 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 FOXP3Q9BZS1 431 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 TDRKHQ9Y2W6 561 aaKnown RBP15.91■□□□□ 0.14
PMS1-221ENST00000624204 I3L4J1 428 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 PDE5AO76074 875 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 ABCD1P33897 745 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 PHBP35232 272 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 GPX6P59796 221 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 SLC25A3Q00325 362 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 KLF1Q13351 362 aaPredicted RBP15.91■□□□□ 0.14
PMS1-221ENST00000624204 BBS9Q3SYG4 887 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 CATSPER2Q96P56 530 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 MECRQ9BV79 373 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 KLHL4Q9C0H6 718 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 CCDC166P0CW27 439 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 GLRA2P23416 452 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 CACNB3P54284 484 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 TMPRSS15P98073 1019 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 HIC1Q14526 733 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 RABGAP1LQ5R372 815 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 B3GNT6Q6ZMB0 384 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 CTAGE3PQ8IX95 158 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 BANPQ8N9N5 519 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 TMEM121Q9BTD3 319 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 GRIP2Q9C0E4 1043 aa15.91■□□□□ 0.14
PMS1-221ENST00000624204 PRR5-ARHGAP8B1AHC4 643 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 MEIS2O14770 477 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 PLSCR1O15162 318 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 ALOX15BO15296 676 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 BUD23O43709 281 aaKnown RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 CLPTM1O96005 669 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 CHN2P52757 468 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 ARHGAP8P85298 464 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 PEX6Q13608 980 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 DNAL1Q4LDG9 190 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 RHOT1Q8IXI2 618 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 TAGLN3Q9UI15 199 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 RABGEF1Q9UJ41 708 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 CYP3A7-CYP3A51PA0A087WV96 503 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 C15orf38-AP3S2A0A0A6YYH1 394 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 H0YIN7 160 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SNHG28P0DPA3 235 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 FUT4P22083 530 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 CYP3A7P24462 503 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 ADSSP30520 456 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SFSWAPQ12872 951 aaKnown RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 CYLC2Q14093 348 aaPredicted RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 UBAP2LQ14157 1087 aaKnown RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 PRKD1Q15139 912 aaPredicted RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 TMEM259Q4ZIN3 620 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 EFHC2Q5JST6 749 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 GPATCH4Q5T3I0 446 aaKnown RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 ARPINQ7Z6K5 226 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.9■□□□□ 0.14
PMS1-221ENST00000624204 FAM172AQ8WUF8 416 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 LENG9Q96B70 501 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 C11orf70Q9BRQ4 267 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SLC13A1Q9BZW2 595 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 S100A14Q9HCY8 104 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 PTTG2Q9NZH5 202 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 GMEB1Q9Y692 573 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SLC26A4O43511 780 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SORBS2O94875 1100 aaKnown RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 SYDE2Q5VT97 1194 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 C1orf228Q6PIY5 440 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 SEMA4DQ92854 862 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 FAM20AQ96MK3 541 aa15.9■□□□□ 0.14
PMS1-221ENST00000624204 TOPORSQ9NS56 1045 aaPredicted RBP15.9■□□□□ 0.14
PMS1-221ENST00000624204 E2F8A0AVK6 867 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 FKBP6O75344 327 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 NRLP54845 237 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 AQP5P55064 265 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 PDE1BQ01064 536 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 MSLNQ13421 630 aaPredicted RBP15.89■□□□□ 0.13
PMS1-221ENST00000624204 ITPK1Q13572 414 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 ALCAMQ13740 583 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 ATP11CQ8NB49 1132 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 VTI1AQ96AJ9 217 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 FIZ1Q96SL8 496 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 ADAMTS6Q9UKP5 1117 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 CLUHO75153 1309 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 ATRNL1Q5VV63 1379 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 RIMBP2O15034 1052 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 SLITRK3O94933 977 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 NSFP46459 744 aaKnown RBP15.89■□□□□ 0.13
PMS1-221ENST00000624204 ZNF200P98182 395 aaPredicted RBP15.89■□□□□ 0.13
PMS1-221ENST00000624204 CBX3Q13185 183 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 EFHC1Q5JVL4 640 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 KLHDC10Q6PID8 442 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 PAOXQ6QHF9 649 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 OGFOD1Q8N543 542 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.89■□□□□ 0.13
PMS1-221ENST00000624204 PLEKHO2Q8TD55 490 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 SHC3Q92529 594 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 VAV3Q9UKW4 847 aa15.89■□□□□ 0.13
PMS1-221ENST00000624204 LOC102724428A0A0B4J2F2 783 aa15.88■□□□□ 0.13
PMS1-221ENST00000624204 LOC100653049A0A140TA62 436 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms