RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 CYP27B1O15528 508 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 ZSCAN22P10073 491 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-213ENST00000622183 IDEP14735 1019 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 COMTP21964 271 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-213ENST00000622183 BIRC3Q13489 604 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 SPARCL1Q14515 664 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 MGAT5BQ3V5L5 792 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 TAF2Q6P1X5 1199 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 GLB1LQ6UWU2 654 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 MAMDC4Q6UXC1 1216 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 POC1BQ8TC44 478 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 TRAPPC12Q8WVT3 735 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 FAM89AQ96GI7 184 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 LRIG1Q96JA1 1093 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 SSBP3Q9BWW4 388 aaPredicted RBP5.83□□□□□ -1.48
CPNE3-213ENST00000622183 TTYH3Q9C0H2 523 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 XYLT2Q9H1B5 865 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 MAGEH1Q9H213 219 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 FAM83DQ9H4H8 585 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 ATP11BQ9Y2G3 1177 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 RAD54BQ9Y620 910 aa5.83□□□□□ -1.48
CPNE3-213ENST00000622183 OTOL1A6NHN0 477 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 LGALS16A8MUM7 142 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 H7C4K7 107 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ACKR2O00590 384 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 PPFIA4O75335 1185 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 SOAT2O75908 522 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 HSD3B1P14060 373 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 VEGFAP15692 232 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 CHRM3P20309 590 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 FGFR4P22455 802 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 SERPINF1P36955 418 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 GCLCP48506 637 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 PTDSS1P48651 473 aaKnown RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 MAN2A2P49641 1150 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF134P52741 427 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 LOXL3P58215 753 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 SATB1Q01826 763 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 POU5F1BQ06416 359 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 PTK2BQ14289 1009 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 UBXN11Q5T124 520 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ARL6IP4Q66PJ3 421 aaKnown RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 PLAG1Q6DJT9 500 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 Q6ZRM9 215 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 Q6ZSN1 163 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 LIMS2Q7Z4I7 341 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 KRT73Q86Y46 540 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF808Q8N4W9 903 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ATG16L2Q8NAA4 619 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 NSUN7Q8NE18 718 aaKnown RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 FAM71BQ8TC56 605 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 SMCR8Q8TEV9 937 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 IPO4Q8TEX9 1081 aaKnown RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 ZNF483Q8TF39 744 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 DCLRE1CQ96SD1 692 aaKnown RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 TMEM120AQ9BXJ8 343 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 DACT1Q9NYF0 836 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 CTTNBP2NLQ9P2B4 639 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 GRHPRQ9UBQ7 328 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 DKK4Q9UBT3 224 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 NEU2Q9Y3R4 380 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 CHST2Q9Y4C5 530 aa5.82□□□□□ -1.48
CPNE3-213ENST00000622183 USP15Q9Y4E8 981 aaPredicted RBP5.82□□□□□ -1.48
CPNE3-213ENST00000622183 CCDC78A2IDD5 438 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 AQP7P3A6NL99 342 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 AQP12BA6NM10 295 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 E7ENX8 843 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 RRP9O43818 475 aaKnown RBP5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SUN1O94901 812 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SPATA31D3P0C874 917 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 KCNA2P16389 499 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 TPH1P17752 444 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 EGR1P18146 543 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 LRPAP1P30533 357 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 TXKP42681 527 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 PXNP49023 591 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SCNN1GP51170 649 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 RNASE9P60153 205 aaKnown RBP5.81□□□□□ -1.48
CPNE3-213ENST00000622183 HSD11B2P80365 405 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 TAP2Q03519 686 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 OCA2Q04671 838 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 MAPKAPK3Q16644 382 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 CRTC1Q6UUV9 634 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 LAYNQ6UX15 382 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 KIAA0408Q6ZU52 694 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SPATA31D4Q6ZUB0 917 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 TMPRSS9Q7Z410 1059 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SIAH1Q8IUQ4 282 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 Q8NA96 180 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 TRIM63Q969Q1 353 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 SMOC2Q9H3U7 446 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 AS3MTQ9HBK9 375 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 IGSF9Q9P2J2 1179 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 EIF2B4Q9UI10 523 aaKnown RBP5.81□□□□□ -1.48
CPNE3-213ENST00000622183 GPR52Q9Y2T5 361 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.81□□□□□ -1.48
CPNE3-213ENST00000622183 CDY1Q9Y6F8 540 aa5.81□□□□□ -1.48
CPNE3-213ENST00000622183 AATKQ6ZMQ8 1374 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms