RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 SAMSN1Q9NSI8 373 aaKnown RBP17.31■□□□□ 0.36
CD40-207ENST00000620709 DLGAP2Q9P1A6 1054 aa17.31■□□□□ 0.36
CD40-207ENST00000620709 STYXL1Q9Y6J8 313 aa17.31■□□□□ 0.36
CD40-207ENST00000620709 ANO9A1A5B4 782 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 MTMR11A4FU01 709 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 GOLGA8IPA6NC78 632 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 GOLGA8JA6NMD2 632 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 MOSPD3O75425 235 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 MICAL2O94851 1124 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 ADSSP30520 456 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 GDI1P31150 447 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 PMS1P54277 932 aaKnown RBP17.3■□□□□ 0.36
CD40-207ENST00000620709 TFAMQ00059 246 aaKnown RBP17.3■□□□□ 0.36
CD40-207ENST00000620709 FOXR2Q6PJQ5 311 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 CRELD2Q6UXH1 353 aaPredicted RBP17.3■□□□□ 0.36
CD40-207ENST00000620709 EFCAB13Q8IY85 973 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 THEM5Q8N1Q8 247 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 TTC9BQ8N6N2 239 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 OR10T2Q8NGX3 314 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 SHKBP1Q8TBC3 707 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 TSG101Q99816 390 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 PCIF1Q9H4Z3 704 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 THAP9Q9H5L6 903 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 LTB4R2Q9NPC1 389 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 IFNKQ9P0W0 207 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 C2CD2Q9Y426 696 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 PCDHB13Q9Y5F0 798 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 SCN1AP35498 2009 aa17.3■□□□□ 0.36
CD40-207ENST00000620709 PTPRZ1P23471 2315 aaPredicted RBP17.29■□□□□ 0.36
CD40-207ENST00000620709 PPP1R37O75864 691 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 IL18RAPO95256 599 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 SP9P0CG40 484 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 PAX3P23760 479 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 CASP5P51878 434 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 VITQ6UXI7 678 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 YAF2Q8IY57 180 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 GLIS3Q8NEA6 775 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
CD40-207ENST00000620709 DSEQ9UL01 958 aa17.29■□□□□ 0.36
CD40-207ENST00000620709 NDRG2Q9UN36 371 aaKnown RBP17.29■□□□□ 0.36
CD40-207ENST00000620709 RIF1Q5UIP0 2472 aaKnown RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 LAMTOR5O43504 91 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 PRPF6O94906 941 aaKnown RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 TPM3P06753 285 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 TARSP26639 723 aaKnown RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 EPHA5P54756 1037 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 UBASH3AP57075 661 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 TAF12Q16514 161 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 SV2CQ496J9 727 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 HSP90AA4PQ58FG1 418 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 WSCD1Q658N2 575 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 ANKRD40Q6AI12 368 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 ZNF852Q6ZMS4 543 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 DNAJB7Q7Z6W7 309 aaPredicted RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 CSGALNACT2Q8N6G5 542 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 ANKRD20A12PQ8NF67 263 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 SCFD1Q8WVM8 642 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 TRIM44Q96DX7 344 aaPredicted RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 DUSP9Q99956 384 aaKnown RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 FGFBP2Q9BYJ0 223 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 XPO4Q9C0E2 1151 aaKnown RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 RBAKQ9NYW8 714 aaPredicted RBP17.28■□□□□ 0.36
CD40-207ENST00000620709 TSC2P49815 1807 aa17.28■□□□□ 0.36
CD40-207ENST00000620709 HEPACAM2A8MVW5 462 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 GOLGA6L6A8MZA4 724 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 ZNF263O14978 683 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
CD40-207ENST00000620709 FGFR1OPO95684 399 aaKnown RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 CYP11A1P05108 521 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 PTMAP06454 111 aaKnown RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 PSMC3P17980 439 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 POLR2BP30876 1174 aaKnown RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 STXBP5Q5T5C0 1151 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 EPM2AIP1Q7L775 607 aaPredicted RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 TMC8Q8IU68 726 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 FAM114A1Q8IWE2 563 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 GIPC2Q8TF65 315 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 DNASE1L2Q92874 299 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 IRF7Q92985 503 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 ZNF560Q96MR9 790 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 LPIN3Q9BQK8 851 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 STRA6Q9BX79 667 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 ZCWPW1Q9H0M4 648 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 ZNF334Q9HCZ1 680 aaPredicted RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 AGAP1Q9UPQ3 857 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 MRPS17Q9Y2R5 130 aaKnown RBP17.27■□□□□ 0.36
CD40-207ENST00000620709 UBE4BO95155 1302 aa17.27■□□□□ 0.36
CD40-207ENST00000620709 KPNA7A9QM74 516 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 NCAM2O15394 837 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 ITGB3P05106 788 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 KRT19P08727 400 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 GABRR2P28476 465 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 WNT7BP56706 349 aa17.26■□□□□ 0.35
CD40-207ENST00000620709 CSTF1Q05048 431 aaKnown RBP17.26■□□□□ 0.35
CD40-207ENST00000620709 BFSP1Q12934 665 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms