RNA–Protein interactions for RNA: ENST00000618440.1

U6.42-201, humanhuman

BASIC

Gene U6, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U6.42-201ENST00000618440 CD6P30203 668 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 PSMC1P62191 440 aaKnown RBP4.43□□□□□ -1.7
U6.42-201ENST00000618440 PXDC1Q5TGL8 231 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 NANOGP1Q8N7R0 232 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 JADE3Q92613 823 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 KAT5Q92993 513 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 FSD1LQ9BXM9 530 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 CALCOCO1Q9P1Z2 691 aa4.43□□□□□ -1.7
U6.42-201ENST00000618440 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.43□□□□□ -1.7
U6.42-201ENST00000618440 ZNF785A8K8V0 405 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 GPR39O43194 453 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 NDUFS2O75306 463 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 HOXA4Q00056 320 aaPredicted RBP4.42□□□□□ -1.7
U6.42-201ENST00000618440 FAPQ12884 760 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 SNAPC2Q13487 334 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 LEXMQ3ZCV2 418 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 PCID2Q5JVF3 399 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 FCRL6Q6DN72 434 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 KIAA1161Q6NSJ0 714 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 MIGA2Q7L4E1 593 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 ZNF804AQ7Z570 1209 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 WDR53Q7Z5U6 358 aaPredicted RBP4.42□□□□□ -1.7
U6.42-201ENST00000618440 PIP4P1Q86T03 277 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 CLPTM1LQ96KA5 538 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 CAMK1GQ96NX5 476 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 CAAP1Q9H8G2 361 aa4.42□□□□□ -1.7
U6.42-201ENST00000618440 VPS4BO75351 444 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 KIF20AO95235 890 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 GJB1P08034 283 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 PRF1P14222 555 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 ENGP17813 658 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 ZNF135P52742 658 aaPredicted RBP4.41□□□□□ -1.7
U6.42-201ENST00000618440 INAVAQ3KP66 663 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 TREML2Q5T2D2 321 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 KRT78Q8N1N4 520 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.41□□□□□ -1.7
U6.42-201ENST00000618440 C16orf52Q8NHV5 167 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 NSUN6Q8TEA1 469 aaKnown RBP4.41□□□□□ -1.7
U6.42-201ENST00000618440 PIGOQ8TEQ8 1089 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 HDAC10Q969S8 669 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 THAP7Q9BT49 309 aaPredicted RBP4.41□□□□□ -1.7
U6.42-201ENST00000618440 SCAF8Q9UPN6 1271 aaKnown RBP4.41□□□□□ -1.7
U6.42-201ENST00000618440 SSX2IPQ9Y2D8 614 aa4.41□□□□□ -1.7
U6.42-201ENST00000618440 GTPBP1O00178 669 aaKnown RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 ADAM10O14672 748 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 SOAT2O75908 522 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 FGBP02675 491 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 ALPLP05186 524 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 CYP2A6P11509 494 aaPredicted RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 ITGALP20701 1170 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 MALP21145 153 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 HOXD9P28356 352 aaPredicted RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 ALDH9A1P49189 494 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 DSC2Q02487 901 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 EGFLAMQ63HQ2 1017 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 CBARPQ8N350 705 aaPredicted RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.4□□□□□ -1.71
U6.42-201ENST00000618440 NSMCE1Q8WV22 266 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 VRK1Q99986 396 aaPredicted RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 FAM126AQ9BYI3 521 aaPredicted RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 RLIMQ9NVW2 624 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 SIDT1Q9NXL6 827 aaKnown RBP4.4□□□□□ -1.71
U6.42-201ENST00000618440 ADAMTS5Q9UNA0 930 aa4.4□□□□□ -1.71
U6.42-201ENST00000618440 MYMKA6NI61 221 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 QSOX1O00391 747 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 GCLCP48506 637 aaPredicted RBP4.39□□□□□ -1.71
U6.42-201ENST00000618440 KLF1Q13351 362 aaPredicted RBP4.39□□□□□ -1.71
U6.42-201ENST00000618440 TWIST1Q15672 202 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 TEDDM1Q5T9Z0 273 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 MEX3CQ5U5Q3 659 aaKnown RBP4.39□□□□□ -1.71
U6.42-201ENST00000618440 SDE2Q6IQ49 451 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 SHC4Q6S5L8 630 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 KIRREL2Q6UWL6 708 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 TRIM72Q6ZMU5 477 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 FAM90A1Q86YD7 464 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 FAM177A1Q8N128 213 aaPredicted RBP4.39□□□□□ -1.71
U6.42-201ENST00000618440 IGFBPL1Q8WX77 278 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 CNPPD1Q9BV87 410 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 C1orf43Q9BWL3 253 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 BRD9Q9H8M2 597 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 SERPINB13Q9UIV8 391 aa4.39□□□□□ -1.71
U6.42-201ENST00000618440 TMA7Q9Y2S6 64 aaKnown RBP4.39□□□□□ -1.71
U6.42-201ENST00000618440 FAM90A10PA6NDY2 464 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 CCDC154A6NI56 674 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 H7C1Q1 480 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 DCLK1O15075 740 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 SLC16A3O15427 465 aaKnown RBP4.38□□□□□ -1.71
U6.42-201ENST00000618440 PCDHGA12O60330 932 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 TJP3O95049 919 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 CHEK2O96017 543 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 HTR6P50406 440 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 RBMS2Q15434 407 aaKnown RBP4.38□□□□□ -1.71
U6.42-201ENST00000618440 KHDC1Q4VXA5 237 aaKnown RBP4.38□□□□□ -1.71
U6.42-201ENST00000618440 C10orf25Q5T742 122 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 MIS18BP1Q6P0N0 1132 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 SLC4A10Q6U841 1118 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 GADL1Q6ZQY3 521 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 C9orf47Q6ZRZ4 202 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 AOPEPQ8N6M6 819 aa4.38□□□□□ -1.71
U6.42-201ENST00000618440 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms