RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PPP2R2BQ00005 443 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KRT39Q6A163 491 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ZNF654Q8IZM8 581 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CXorf40BQ96DE9 158 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 SYNPO2Q9UMS6 1093 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 COL11A2P13942 1736 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 UBA6A0AVT1 1052 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 FAM234BA2RU67 622 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 BTBD18B2RXH4 712 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KIF2AO00139 706 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 FSHRP23945 695 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 ACADSBP45954 432 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PSMD5Q16401 504 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GKAP1Q5VSY0 366 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 HORMAD2Q8N7B1 307 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TUBGCP3Q96CW5 907 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KRT12Q99456 494 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 DGAT1O75907 488 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PLGLB1Q02325 96 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 TBX2Q13207 712 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 SIM2Q14190 667 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 NXNQ6DKJ4 435 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 FANCBQ8NB91 859 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KCNE4Q8WWG9 221 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RUNDC3BQ96NL0 473 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 PKP3Q9Y446 797 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KERAO60938 352 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CHRM1P11229 460 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 MSH2P43246 934 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 GRIK3Q13003 919 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 OTOAQ7RTW8 1153 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 CDC26Q8NHZ8 85 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 RERGQ96A58 199 aaPredicted RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 VPS39Q96JC1 886 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 KLHL11Q9NVR0 708 aa3.52□□□□□ -1.85
LPP-220ENST00000617246 MTCL1Q9Y4B5 1905 aaKnown RBP3.52□□□□□ -1.85
LPP-220ENST00000617246 A8MXQ7 604 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TPD52L2O43399 206 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 AOC2O75106 756 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CBSLP0DN79 551 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PTPN2P17706 415 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TAC1P20366 129 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CBSP35520 551 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 HLFQ16534 295 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ANGPTL8Q6UXH0 198 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PPP4R3CPQ6ZMV5 832 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 RCOR2Q8IZ40 523 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ITIH6Q6UXX5 1313 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FAM200BP0CF97 657 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 PPP2R5CQ13362 524 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 XKR3Q5GH77 459 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CATSPEREQ5SY80 951 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 LYPLAL1Q5VWZ2 237 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 METTL16Q86W50 562 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.51□□□□□ -1.85
LPP-220ENST00000617246 CARD9Q9H257 536 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 LRRC4BQ9NT99 713 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 DUS2Q9NX74 493 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 CWC15Q9P013 229 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 FEZ2Q9UHY8 353 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 PNMA6FA0A0J9YX94 578 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SPDYE5A6NIY4 337 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TACC1O75410 805 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 HBQ1P09105 142 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 QARSP47897 775 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 CDK8P49336 464 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ALDH5A1P51649 535 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 RAD23AP54725 363 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 C12orf40Q86WS4 652 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CHSY1Q86X52 802 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TRPM4Q8TD43 1214 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SLC26A7Q8TE54 656 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZNF592Q92610 1267 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 USP7Q93009 1102 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 MAGED4Q96JG8 741 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SLAMF7Q9NQ25 335 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ZBTB12Q9Y330 459 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 POLRMTO00411 1230 aaKnown RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 TRAK2O60296 914 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SGPL1O95470 568 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TGFB3P10600 412 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 WEE1P30291 646 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 AKT2P31751 481 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 NPEPPSP55786 919 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 FSCBQ5H9T9 825 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CORO1BQ9BR76 489 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SLC39A8Q9C0K1 460 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CENPHQ9H3R5 247 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 FPGTO14772 594 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CNR2P34972 360 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 TAP1Q03518 808 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 INSCQ1MX18 579 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 EMC10Q5UCC4 262 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 DSCC1Q9BVC3 393 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 ASNSD1Q9NWL6 643 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SUCLA2Q9P2R7 463 aaPredicted RBP3.51□□□□□ -1.85
LPP-220ENST00000617246 COPS7AQ9UBW8 275 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 SMPD1P17405 629 aa3.51□□□□□ -1.85
LPP-220ENST00000617246 CDH15P55291 814 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms