RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 SURF1Q15526 300 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 CRY1Q16526 586 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MEA1Q16626 185 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 EFCAB12Q6NXP0 572 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 DUS1LQ6P1R4 473 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 NFRKBQ6P4R8 1299 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 TRPC4APQ8TEL6 797 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 PRPF31Q8WWY3 499 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 MRPL4Q9BYD3 311 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 ARHGAP39Q9C0H5 1083 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 HSPBP1Q9NZL4 362 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 TNFSF13BQ9Y275 285 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 COQ4Q9Y3A0 265 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 A0A0B4J269 797 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 AKR1B15C9JRZ8 316 aaPredicted RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 DYNC1LI2O43237 492 aaPredicted RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 TEX33O43247 280 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MFAP3LO75121 409 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 LCA5LO95447 670 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SMIM10L2AP0DMW4 78 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SMIM10L2BP0DMW5 78 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 RARBP10826 455 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 ADSSP30520 456 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 POLR2FP61218 127 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 SP4Q02446 784 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 UBXN1Q04323 297 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 BFSP1Q12934 665 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 PTGISQ16647 500 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 FAM209AQ5JX71 171 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 LLGL2Q6P1M3 1020 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MAP7D3Q8IWC1 876 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 GPD1LQ8N335 351 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SCAIQ8N9R8 606 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 TC2NQ8N9U0 490 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 PCSK9Q8NBP7 692 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 GSDMBQ8TAX9 411 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SH3TC2Q8TF17 1288 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 ATRIPQ8WXE1 791 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 IFT81Q8WYA0 676 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 C8orf48Q96LL4 319 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 CATSPER2Q96P56 530 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 RPS6KC1Q96S38 1066 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 HNRNPABQ99729 332 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 FAM192AQ9GZU8 254 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 TPK1Q9H3S4 243 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 ARHGEF38Q9NXL2 777 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 DLGAP2Q9P1A6 1054 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 CDC23Q9UJX2 597 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MOXD2PA6NHM9 499 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 CCDC169A6NNP5 214 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 K7ERI5 159 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 PARNO95453 639 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 FAM107AO95990 144 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 ATP2A2P16615 1042 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 KLRC1P26715 233 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 MBTD1Q05BQ5 628 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 PSMD6Q15008 389 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 TAF2Q6P1X5 1199 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 PPFIBP1Q86W92 1011 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SPERTQ8NA61 448 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 GOLM1Q8NBJ4 401 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SKA1Q96BD8 255 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 HAUS1Q96CS2 278 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 ADAMTS10Q9H324 1103 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 FAM124BQ9H5Z6 455 aaPredicted RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 FKBP14Q9NWM8 211 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 EURLQ9NYK6 297 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 KIAA1522Q9P206 1035 aaPredicted RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 TMA7Q9Y2S6 64 aaKnown RBP9.29□□□□□ -0.92
VPS11-206ENST00000614944 FADS3Q9Y5Q0 445 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 SQORQ9Y6N5 450 aa9.29□□□□□ -0.92
VPS11-206ENST00000614944 A0A0J9YVX5 310 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 AGPSO00116 658 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 FAM189A1O60320 539 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 ZC3H11AO75152 810 aaKnown RBP eCLIP9.28□□□□□ -0.92
VPS11-206ENST00000614944 TOM1L1O75674 476 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 GYPCP04921 128 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 PDHA1P08559 390 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 GHRP10912 638 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 TMEM139Q8IV31 216 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 FAM20CQ8IXL6 584 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 LINC00469Q8N7U9 141 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 CCDC63Q8NA47 563 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 TNIP2Q8NFZ5 429 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 TMEM143Q96AN5 459 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 ERP27Q96DN0 273 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 ACO2Q99798 780 aaKnown RBP9.28□□□□□ -0.92
VPS11-206ENST00000614944 DCAF16Q9NXF7 216 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 CEP72Q9P209 647 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 STK39Q9UEW8 545 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 KIAA1257Q9ULG3 409 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 SPECC1L-ADORA2AF8WAN1 911 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 PYGMP11217 842 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 RBL2Q08999 1139 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 KCNH2Q12809 1159 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 MAPK6Q16659 721 aa9.28□□□□□ -0.92
VPS11-206ENST00000614944 AMHR2Q16671 573 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms