RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 FAM155BO75949 473 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 KRT37O76014 449 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 RNF8O76064 485 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 PROSCO94903 275 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 FESP07332 822 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 MSX2P35548 267 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 EIF3EP60228 445 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 CLEC16AQ2KHT3 1053 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 RIPOR1Q6ZS17 1223 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 NDUFAF2Q8N183 169 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 CHURC1Q8WUH1 139 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 P2RX7Q99572 595 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 AK5Q9Y6K8 562 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 ZHX2Q9Y6X8 837 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 P4HBP07237 508 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 RBP3P10745 1247 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 ZNF200P98182 395 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 MTMR1Q13613 665 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 UBAP2LQ14157 1087 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 TMEM179Q6ZVK1 233 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 NME8Q8N427 588 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 GSTCDQ8NEC7 633 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 VTI1AQ96AJ9 217 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 OXNAD1Q96HP4 312 aaPredicted RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 GCNAQ96QF7 691 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 TMEM109Q9BVC6 243 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 VPS11Q9H270 941 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 NGRNQ9NPE2 291 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 PDP2Q9P2J9 529 aa12.34□□□□□ -0.43
CDH5-208ENST00000614547 APOBEC2Q9Y235 224 aaKnown RBP12.34□□□□□ -0.43
CDH5-208ENST00000614547 HNRNPRO43390 633 aaKnown RBP12.33□□□□□ -0.43
CDH5-208ENST00000614547 SLC1A1P43005 524 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 CENPCQ03188 943 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 PEX6Q13608 980 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 DBN1Q16643 649 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 HYIQ5T013 277 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 LRRC43Q8N309 656 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 E2F7Q96AV8 911 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 ZNF333Q96JL9 665 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 AGBL1Q96MI9 1066 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 EPAS1Q99814 870 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 TAS2R1Q9NYW7 299 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 WRAP73Q9P2S5 460 aaPredicted RBP12.33□□□□□ -0.43
CDH5-208ENST00000614547 INPP5FQ9Y2H2 1132 aa12.33□□□□□ -0.43
CDH5-208ENST00000614547 AIM2O14862 343 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 AVILO75366 819 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 SUPT3HO75486 399 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 CSDE1O75534 798 aaKnown RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 TCF4P15884 667 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ELK3P41970 407 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ARHGEF16Q5VV41 709 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ATG16L1Q676U5 607 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 POTEAQ6S8J7 498 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 POLNQ7Z5Q5 900 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 CDR2LQ86X02 465 aaPredicted RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 WDR75Q8IWA0 830 aaKnown RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 NLGN1Q8N2Q7 840 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ICA1LQ8NDH6 482 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 OPTNQ96CV9 577 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 SLC7A6OSQ96CW6 309 aaPredicted RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 RAVER2Q9HCJ3 691 aaKnown RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 FZD1Q9UP38 647 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 PCDHB2Q9Y5E7 798 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 SCINQ9Y6U3 715 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 CCDC78A2IDD5 438 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ACAP1Q15027 740 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ZBTB46Q86UZ6 589 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 FAM71AQ8IYT1 594 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 ZCCHC9Q8N567 271 aaKnown RBP12.33□□□□□ -0.44
CDH5-208ENST00000614547 DEPDC1BQ8WUY9 529 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 WWP1Q9H0M0 922 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 KCNH7Q9NS40 1196 aa12.33□□□□□ -0.44
CDH5-208ENST00000614547 A6NJR5 290 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 XPO1O14980 1071 aaKnown RBP12.32□□□□□ -0.44
CDH5-208ENST00000614547 GTF2H1P32780 548 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 SKIV2L2P42285 1042 aaKnown RBP12.32□□□□□ -0.44
CDH5-208ENST00000614547 WDR78Q5VTH9 848 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 C16orf46Q6P387 395 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 ASRGL1Q7L266 308 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 GALNT15Q8N3T1 639 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 FEZF2Q8TBJ5 459 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 C10orf82Q8WW14 230 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 PHF12Q96QT6 1004 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 TUBGCP5Q96RT8 1024 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 TMEM8AQ9HCN3 771 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 GABBR1Q9UBS5 961 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 IP6K2Q9UHH9 426 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 TTLL3Q9Y4R7 772 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CYB561D2O14569 222 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CFHP08603 1231 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 GSTA2P09210 222 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CCNB1P14635 433 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 GLRA2P23416 452 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 PSMC5P62195 406 aa12.32□□□□□ -0.44
CDH5-208ENST00000614547 CDK16Q00536 496 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms