RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 CYLC1P35663 651 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 AARSP49588 968 aaKnown RBP eCLIP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 SIGLEC14Q08ET2 396 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 INCA1Q0VD86 236 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 UPP1Q16831 310 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 ASTE1Q2TB18 679 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 TDRD12Q587J7 1177 aaKnown RBP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 LIMS2Q7Z4I7 341 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 ABI1Q8IZP0 508 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 EFHBQ8N7U6 833 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 EPS8L1Q8TE68 723 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 POF1BQ8WVV4 589 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 SYT11Q9BT88 431 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 SMYD3Q9H7B4 428 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 NHEJ1Q9H9Q4 299 aaPredicted RBP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 KCND1Q9NSA2 647 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 CISHQ9NSE2 258 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
SLIRP-212ENST00000613856 NXF1Q9UBU9 619 aaKnown RBP12.2□□□□□ -0.46
SLIRP-212ENST00000613856 ATP8B3O60423 1300 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 KPNA7A9QM74 516 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 EIF3CLB5ME19 914 aaKnown RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM189-UBE2V1I3L0A0 370 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 NDUFA10O95299 355 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 LCA5LO95447 670 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 IBSPP21815 317 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 CLCN1P35523 988 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 EIF4A3P38919 411 aaKnown RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 CLCNKBP51801 687 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 KIF11P52732 1056 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 BPIFB4P59827 614 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 LILRA4P59901 499 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 ARID5AQ03989 594 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 PTK2Q05397 1052 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 BMS1Q14692 1282 aaKnown RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 SCARA5Q6ZMJ2 495 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 DPH6Q7L8W6 267 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 VPS36Q86VN1 386 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 TOP6BLQ8N6T0 577 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 OLIG1Q8TAK6 271 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 KIAA1524Q8TCG1 905 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 CCDC42Q96M95 316 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 EIF3CQ99613 913 aaKnown RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 SDCBP2Q9H190 292 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 HAUS4Q9H6D7 363 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 NOCTQ9UK39 431 aaKnown RBP12.19□□□□□ -0.46
SLIRP-212ENST00000613856 PCDHB4Q9Y5E5 795 aa12.19□□□□□ -0.46
SLIRP-212ENST00000613856 DMXL1Q9Y485 3027 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 CASTOR2A6NHX0 329 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 SPTLC1O15269 473 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 CYP26A1O43174 497 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 CILPO75339 1184 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 TACC1O75410 805 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 KRT5P13647 590 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 CYP11B1P15538 503 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 USP8P40818 1118 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 PDE6CP51160 858 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 MTF1Q14872 753 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 SLC18A3Q16572 532 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM270Q6UE05 265 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 ZNF677Q86XU0 584 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 COLGALT2Q8IYK4 626 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 LRRC43Q8N309 656 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 SPATA18Q8TC71 538 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 SUSD6Q92537 303 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM175Q9BSA9 504 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 PHF7Q9BWX1 381 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-212ENST00000613856 DEF6Q9H4E7 631 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 NENFQ9UMX5 172 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 SNX9Q9Y5X1 595 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 EPN1Q9Y6I3 576 aaPredicted RBP12.18□□□□□ -0.46
SLIRP-212ENST00000613856 FAM186AA6NE01 2351 aa12.18□□□□□ -0.46
SLIRP-212ENST00000613856 ARHGEF37A1IGU5 675 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 PRR23AA6NEV1 266 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 CCP110O43303 1012 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 AKR1B10O60218 316 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 B4GALT3O60512 393 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 DDHD2O94830 711 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 PAEPP09466 180 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 WEE2P0C1S8 567 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 CD58P19256 250 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 RAP1GAPP47736 663 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
SLIRP-212ENST00000613856 SOWAHAQ2M3V2 549 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 DCLRE1AQ6PJP8 1040 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 TOGARAM2Q6ZUX3 1019 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 NOP9Q86U38 636 aaKnown RBP12.17□□□□□ -0.46
SLIRP-212ENST00000613856 SLC47A2Q86VL8 602 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 UNC93AQ86WB7 457 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 ZNF280BQ86YH2 543 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 GPIHBP1Q8IV16 184 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM86AQ8N2M4 240 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 TMEM105Q8N8V8 129 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 C3orf58Q8NDZ4 430 aa12.17□□□□□ -0.46
SLIRP-212ENST00000613856 FEZF2Q8TBJ5 459 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms