RNA–Protein interactions for RNA: ENST00000611481.1

LINC00540-201, long intergenic non-protein coding RNA 540, humanhuman

TSL 4

Gene LINC00540, Length 588 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-201ENST00000611481 CCDC66A2RUB6 948 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 MBTPS2O43462 519 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 PLIN1O60240 522 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 MAFO75444 373 aaPredicted RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 RHOBTB3O94955 611 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 PARNO95453 639 aaKnown RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 HOXA7P31268 230 aaPredicted RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 ADRA1BP35368 520 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 DNM2P50570 870 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 ATP2C1P98194 919 aaPredicted RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 ADAM15Q13444 863 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 TOB2Q14106 344 aaPredicted RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 CCDC142Q17RM4 750 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 CDC42EP5Q6NZY7 148 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 DEFB128Q7Z7B8 93 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 HIPK4Q8NE63 616 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 CYP2W1Q8TAV3 490 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 CALML6Q8TD86 181 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 RIPOR3Q96MK2 946 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 GLT1D1Q96MS3 346 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 GBP4Q96PP9 640 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 CDC6Q99741 560 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 SPATA9Q9BWV2 254 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 WNT8AQ9H1J5 351 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 SLC6A15Q9H2J7 730 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 TMX1Q9H3N1 280 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 TMOD4Q9NZQ9 345 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 ASB1Q9Y576 335 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 COL4A3BPQ9Y5P4 624 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 MRPL42Q9Y6G3 142 aaKnown RBP5.31□□□□□ -1.56
LINC00540-201ENST00000611481 DOCK2Q92608 1830 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 OTOGLQ3ZCN5 2332 aa5.31□□□□□ -1.56
LINC00540-201ENST00000611481 ELP1O95163 1332 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 A0A0U1RQG5 324 aaPredicted RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 ENPP3O14638 875 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 FOXP2O15409 715 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 H2AFYO75367 372 aaKnown RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 CNMDO75829 334 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 APEX1P27695 318 aaKnown RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 ADCY7P51828 1080 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 SUMO1P63165 101 aaKnown RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 TCEAL5Q5H9L2 206 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 KLHDC10Q6PID8 442 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 MRGPREQ86SM8 312 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 RPAINQ86UA6 219 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 ZC3H7AQ8IWR0 971 aaKnown RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 CKAP2LQ8IYA6 745 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 PHOSPHO2Q8TCD6 241 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 MKL1Q969V6 931 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 IPO9Q96P70 1041 aaKnown RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 PCDH12Q9NPG4 1184 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 KCNH7Q9NS40 1196 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 IFT57Q9NWB7 429 aa5.3□□□□□ -1.56
LINC00540-201ENST00000611481 USP9XQ93008 2570 aaPredicted RBP5.3□□□□□ -1.56
LINC00540-201ENST00000611481 MAST3O60307 1309 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 SYNRGQ9UMZ2 1314 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 MYH3P11055 1940 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 TRBV23-1A0A0A0MS06 115 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 MYADML2A6NDP7 307 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 SCDO00767 359 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 FRAT2O75474 233 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 NUDT3O95989 172 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 CD4P01730 458 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 ACTN1P12814 892 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 ADORA2AP29274 412 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 STAT3P40763 770 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 RGS3P49796 1198 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 BACE1P56817 501 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 ERVK-21P61565 698 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 ELAVL1Q15717 326 aaKnown RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 KRT24Q2M2I5 525 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 MBNL2Q5VZF2 373 aaKnown RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 TMCO2Q7Z6W1 182 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 TICAM2Q86XR7 235 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 EXOC8Q8IYI6 725 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 BCL6BQ8N143 479 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 TBC1D22AQ8WUA7 517 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 SLC25A43Q8WUT9 341 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 RUBCNQ92622 972 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 GCDHQ92947 438 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 GFM2Q969S9 779 aaKnown RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 MRPL38Q96DV4 380 aaKnown RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 FAM84BQ96KN1 310 aaPredicted RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 TGS1Q96RS0 853 aaKnown RBP5.29□□□□□ -1.56
LINC00540-201ENST00000611481 GPR87Q9BY21 358 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 AS3MTQ9HBK9 375 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 ANGPTL2Q9UKU9 493 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 RABGAP1Q9Y3P9 1069 aa5.29□□□□□ -1.56
LINC00540-201ENST00000611481 HELZ2Q9BYK8 2649 aaKnown RBP5.28□□□□□ -1.56
LINC00540-201ENST00000611481 TNKSO95271 1327 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 A0A1B0GUL7 405 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 DDTLA6NHG4 134 aaPredicted RBP5.28□□□□□ -1.56
LINC00540-201ENST00000611481 LOC730098B7Z3J9 87 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 PPP1R12AO14974 1030 aaPredicted RBP5.28□□□□□ -1.56
LINC00540-201ENST00000611481 DNAJC6O75061 913 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 PROS1P07225 676 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 ASGR1P07306 291 aa5.28□□□□□ -1.56
LINC00540-201ENST00000611481 PFKMP08237 780 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms