RNA–Protein interactions for RNA: ENST00000611205.4

CDKN3-211, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKN3, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-211ENST00000611205 LRP3O75074 770 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 GCNT3O95395 438 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 F11P03951 625 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 ITGB3P05106 788 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 HMGA1P17096 107 aaKnown RBP26.25■■□□□ 1.79
CDKN3-211ENST00000611205 NLRP12P59046 1061 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 L1TD1Q5T7N2 865 aaKnown RBP26.25■■□□□ 1.79
CDKN3-211ENST00000611205 SDHAF4Q5VUM1 108 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 TRIM68Q6AZZ1 485 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 SV2BQ7L1I2 683 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 BRSK2Q8IWQ3 736 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 ZSWIM2Q8NEG5 633 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 NOC3LQ8WTT2 800 aaKnown RBP26.25■■□□□ 1.79
CDKN3-211ENST00000611205 STRA6Q9BX79 667 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 EBF3Q9H4W6 596 aa26.25■■□□□ 1.79
CDKN3-211ENST00000611205 GAP43P17677 238 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 DDX6P26196 483 aaKnown RBP eCLIP26.24■■□□□ 1.79
CDKN3-211ENST00000611205 TXLNAP40222 546 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 RUNX3Q13761 415 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 TXNDC8Q6A555 127 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 PRR23CQ6ZRP0 262 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 PDCL2Q8N4E4 241 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 NETO1Q8TDF5 533 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 MRPS31Q92665 395 aaKnown RBP26.24■■□□□ 1.79
CDKN3-211ENST00000611205 USP13Q92995 863 aaPredicted RBP26.24■■□□□ 1.79
CDKN3-211ENST00000611205 CLIC6Q96NY7 704 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 FAM83CQ9BQN1 747 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 HPS4Q9NQG7 708 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 FBXO2Q9UK22 296 aaPredicted RBP26.24■■□□□ 1.79
CDKN3-211ENST00000611205 GREB1Q4ZG55 1949 aa26.24■■□□□ 1.79
CDKN3-211ENST00000611205 EXTL3O43909 919 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 HUS1O60921 280 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 CSH1P0DML2 217 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 CSH2P0DML3 217 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 IDEP14735 1019 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 ACAT1P24752 427 aaKnown RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 NFE2Q16621 373 aaPredicted RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 PKN3Q6P5Z2 889 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 WDR5BQ86VZ2 330 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 SYCP3Q8IZU3 236 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 FAM160A2Q8N612 972 aaPredicted RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 C1orf127Q8N9H9 656 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 CACTINQ8WUQ7 758 aaKnown RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 DNAJC19Q96DA6 116 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 TDP1Q9NUW8 608 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 DDX43Q9NXZ2 648 aaKnown RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 RBAKQ9NYW8 714 aaPredicted RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 L1RE1Q9UN81 338 aa26.23■■□□□ 1.79
CDKN3-211ENST00000611205 SRPRBQ9Y5M8 271 aaKnown RBP26.23■■□□□ 1.79
CDKN3-211ENST00000611205 EML5Q05BV3 1969 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 ANAPC1Q9H1A4 1944 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 GOLGA8IPA6NC78 632 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 GOLGA8JA6NMD2 632 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 LDHAP00338 332 aaKnown RBP26.22■■□□□ 1.79
CDKN3-211ENST00000611205 KRT19P08727 400 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 MYL7Q01449 175 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 CEBPZQ03701 1054 aaKnown RBP26.22■■□□□ 1.79
CDKN3-211ENST00000611205 GRSF1Q12849 480 aaKnown RBP eCLIP26.22■■□□□ 1.79
CDKN3-211ENST00000611205 CSRP2Q16527 193 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 DDR2Q16832 855 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 CC2D1AQ6P1N0 951 aaPredicted RBP26.22■■□□□ 1.79
CDKN3-211ENST00000611205 FAM84AQ96KN4 292 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 CNTNAP3BQ96NU0 1288 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 CNTNAP3Q9BZ76 1288 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 KIF9Q9HAQ2 790 aa26.22■■□□□ 1.79
CDKN3-211ENST00000611205 SDK1Q7Z5N4 2213 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 CYP2F1P24903 491 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 HOXA6P31267 233 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 PXNP49023 591 aaPredicted RBP26.21■■□□□ 1.79
CDKN3-211ENST00000611205 CASP5P51878 434 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 TMEM196Q5HYL7 178 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 FSTL4Q6MZW2 842 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 FAM173BQ6P4H8 233 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 CSGALNACT2Q8N6G5 542 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 TTC16Q8NEE8 873 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 ACBD6Q9BR61 282 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 PCDHB13Q9Y5F0 798 aa26.21■■□□□ 1.79
CDKN3-211ENST00000611205 OTOL1A6NHN0 477 aaPredicted RBP26.2■■□□□ 1.78
CDKN3-211ENST00000611205 SLC30A4O14863 429 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 ARSAP15289 507 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 PDCP20941 246 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 GARTP22102 1010 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 RPL10AP62906 217 aaKnown RBP26.2■■□□□ 1.78
CDKN3-211ENST00000611205 INTS6LQ5JSJ4 861 aaKnown RBP26.2■■□□□ 1.78
CDKN3-211ENST00000611205 SCARA3Q6AZY7 606 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 MON1AQ86VX9 555 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 TMEM86AQ8N2M4 240 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 RIN3Q8TB24 985 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 LEO1Q8WVC0 666 aaPredicted RBP26.2■■□□□ 1.78
CDKN3-211ENST00000611205 PANK2Q9BZ23 570 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 PCIF1Q9H4Z3 704 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 TRPC7Q9HCX4 862 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 GTF3C4Q9UKN8 822 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 SLC8A2Q9UPR5 921 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 SNX9Q9Y5X1 595 aa26.2■■□□□ 1.78
CDKN3-211ENST00000611205 MYO16Q9Y6X6 1858 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 GDF9O60383 454 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 STAT6P42226 847 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 CCDC73Q6ZRK6 1079 aa26.19■■□□□ 1.78
CDKN3-211ENST00000611205 OSTM1Q86WC4 334 aa26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms