RNA–Protein interactions for RNA: ENST00000611068.1

RTN1-209, Transcript of reticulon 1, humanhuman

TSL 5 BASIC

Gene RTN1, Length 2,647 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-209ENST00000611068 FAM13CQ8NE31 585 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 FAM167AQ96KS9 214 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 NOX5Q96PH1 765 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 AKT3Q9Y243 479 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 H3BRB1 525 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 NVLO15381 856 aaKnown RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 ENTPD5O75356 428 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 SUPT3HO75486 399 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 IQCF3P0C7M6 154 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 RTP1P59025 263 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 MTMR3Q13615 1198 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 ASTE1Q2TB18 679 aaPredicted RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 ABRAQ8N0Z2 381 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 NCSTNQ92542 709 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 ZNF516Q92618 1163 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 KCNN1Q92952 543 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TMEM237Q96Q45 408 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 LBHD1Q9BQE6 289 aaPredicted RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 NSRP1Q9H0G5 558 aaKnown RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
RTN1-209ENST00000611068 APEX2Q9UBZ4 518 aa16.84■□□□□ 0.29
RTN1-209ENST00000611068 TJP3O95049 919 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 CCNB1P14635 433 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 FGFR4P22455 802 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 LRRC14Q15048 493 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 OLFML2BQ68BL8 750 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 DUS1LQ6P1R4 473 aaKnown RBP16.83■□□□□ 0.29
RTN1-209ENST00000611068 C12orf56Q8IXR9 622 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 GBP7Q8N8V2 638 aaPredicted RBP16.83■□□□□ 0.29
RTN1-209ENST00000611068 C17orf50Q8WW18 174 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.83■□□□□ 0.29
RTN1-209ENST00000611068 IQCDQ96DY2 449 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 C16orf70Q9BSU1 422 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 SPATA16Q9BXB7 569 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 ABHD16BQ9H3Z7 469 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 SETD4Q9NVD3 440 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 AIPL1Q9NZN9 384 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 INTUQ9ULD6 942 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 LRCH1Q9Y2L9 728 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 ATP8A1Q9Y2Q0 1164 aa16.83■□□□□ 0.29
RTN1-209ENST00000611068 FAM155AB1AL88 458 aaPredicted RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 TNPO2O14787 897 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 HBP1O60381 514 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 PDE6CP51160 858 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 CDK17Q00537 523 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 MGAT5Q09328 741 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 MAP2K5Q13163 448 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 LSAMPQ13449 338 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SV2AQ7L0J3 742 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 ZC3H18Q86VM9 953 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 THNSL1Q8IYQ7 743 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 RNF168Q8IYW5 571 aaPredicted RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 PPTC7Q8NI37 304 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 DHX38Q92620 1227 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 CORO1BQ9BR76 489 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 AP1M1Q9BXS5 423 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 EDEM3Q9BZQ6 932 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 GPR88Q9GZN0 384 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 RXFP1Q9HBX9 757 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SLC15A5A6NIM6 579 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 AOC2O75106 756 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SUN1O94901 812 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SLC10A3P09131 477 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 JAM2P57087 298 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 DUSP28Q4G0W2 176 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 IER5Q5VY09 327 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SPOPLQ6IQ16 392 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 ENDOVQ8N8Q3 282 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 SMC1BQ8NDV3 1235 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 SNRNP27Q8WVK2 155 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
RTN1-209ENST00000611068 TMEM59LQ9UK28 342 aa16.83■□□□□ 0.28
RTN1-209ENST00000611068 GRID2IPA4D2P6 1211 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 TCP11X1B4DZS4 312 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 CLDN3O15551 220 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 UNC5CO95185 931 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 PRKCBP05771 671 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 UBTFL6P0CB48 400 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 MYBPC2Q14324 1141 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 MORN1Q5T089 497 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 C17orf99Q6UX52 265 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 ZNF365Q70YC5 407 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 GLYCTKQ8IVS8 523 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 ZBTB8BQ8NAP8 495 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 FAM192AQ9GZU8 254 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 FAM49AQ9H0Q0 323 aaPredicted RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 DDX47Q9H0S4 455 aaKnown RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 CCDC134Q9H6E4 229 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 A0A087WZ62 844 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 GTPBP10A4D1E9 387 aaKnown RBP16.82■□□□□ 0.28
RTN1-209ENST00000611068 C22orf31O95567 290 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 MMP3P08254 477 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 ZCCHC18P0CG32 403 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 SMYD1Q8NB12 490 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 SLC20A1Q8WUM9 679 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 GATA6Q92908 595 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 CPB2Q96IY4 423 aa16.82■□□□□ 0.28
RTN1-209ENST00000611068 HIC2Q96JB3 615 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms