RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 KRBA1A5PL33 1030 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 STK25O00506 426 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 CST3P01034 146 aaPredicted RBP16.17■□□□□ 0.18
LMBR1-220ENST00000609081 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 CSH1P0DML2 217 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 CSH2P0DML3 217 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 ATF6P18850 670 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 FCARP24071 287 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 MAGEA11P43364 429 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 STARD6P59095 220 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 WDR72Q3MJ13 1102 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 IER5LQ5T953 404 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 TANGO2Q6ICL3 276 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 FAM171BQ6P995 826 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 SPATA2LQ8IUW3 424 aaPredicted RBP16.17■□□□□ 0.18
LMBR1-220ENST00000609081 ZSCAN18Q8TBC5 510 aaPredicted RBP16.17■□□□□ 0.18
LMBR1-220ENST00000609081 GSDMAQ96QA5 445 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 MMS19Q96T76 1030 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 TRMT61BQ9BVS5 477 aaKnown RBP16.17■□□□□ 0.18
LMBR1-220ENST00000609081 ATXN3LQ9H3M9 355 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 OBP2AQ9NY56 170 aa16.17■□□□□ 0.18
LMBR1-220ENST00000609081 DENND4CQ5VZ89 1909 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 SMC2O95347 1197 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 PSMC3P17980 439 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 DDX6P26196 483 aaKnown RBP eCLIP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 GABRR2P28476 465 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 NHLH1Q02575 133 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 BIRC3Q13489 604 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 SNW1Q13573 536 aaKnown RBP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 TEAD2Q15562 447 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 MLF2Q15773 248 aaPredicted RBP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 SLC44A4Q53GD3 710 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 VSTM1Q6UX27 236 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 INTS8Q75QN2 995 aaKnown RBP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 GAREM2Q75VX8 874 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 MFSD6LQ8IWD5 586 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 ELOA2Q8IYF1 753 aaPredicted RBP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 PRSS33Q8NF86 280 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 ZNF516Q92618 1163 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 TAF4BQ92750 862 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 IRF7Q92985 503 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 FAM84AQ96KN4 292 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 NELL2Q99435 816 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 SYT15Q9BQS2 421 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 PI4K2AQ9BTU6 479 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 OSBPL6Q9BZF3 934 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
LMBR1-220ENST00000609081 SNX25Q9H3E2 840 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 TBC1D17Q9HA65 648 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 GTF3C4Q9UKN8 822 aa16.16■□□□□ 0.18
LMBR1-220ENST00000609081 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 SOAT2O75908 522 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 C4BPAP04003 597 aaKnown RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 P4HA1P13674 534 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 NR2F2P24468 414 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 MAGEA9P43362 315 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 EDRF1Q3B7T1 1238 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 ZACNQ401N2 412 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 COBLL1Q53SF7 1204 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 CEP135Q66GS9 1140 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 OSTM1Q86WC4 334 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 CCDC105Q8IYK2 499 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 ENGASEQ8NFI3 743 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 TRMT2BQ96GJ1 504 aaKnown RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 ZSWIM3Q96MP5 696 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 LPIN3Q9BQK8 851 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 DDX23Q9BUQ8 820 aaKnown RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 XYLT2Q9H1B5 865 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 TASP1Q9H6P5 420 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 BRD9Q9H8M2 597 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 ZNF334Q9HCZ1 680 aaPredicted RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 TMLHEQ9NVH6 421 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 EHD2Q9NZN4 543 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 MAGEC2Q9UBF1 373 aaPredicted RBP16.15■□□□□ 0.18
LMBR1-220ENST00000609081 SIT1Q9Y3P8 196 aa16.15■□□□□ 0.18
LMBR1-220ENST00000609081 MIA3Q5JRA6 1907 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 KANSL1LA0AUZ9 987 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 GLULP15104 373 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 GJA1P17302 382 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 ACAT1P24752 427 aaKnown RBP16.14■□□□□ 0.17
LMBR1-220ENST00000609081 PSMC2P35998 433 aaKnown RBP16.14■□□□□ 0.17
LMBR1-220ENST00000609081 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
LMBR1-220ENST00000609081 MLLT6P55198 1093 aaPredicted RBP16.14■□□□□ 0.17
LMBR1-220ENST00000609081 MYL6P60660 151 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 TCF15Q12870 199 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 NCOA4Q13772 614 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 SGSM1Q2NKQ1 1148 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 ZNF699Q32M78 642 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 ZNF667Q5HYK9 610 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 GPR158Q5T848 1215 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 TDRD10Q5VZ19 366 aaKnown RBP16.14■□□□□ 0.17
LMBR1-220ENST00000609081 SCARA3Q6AZY7 606 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 C1orf228Q6PIY5 440 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 POTEHQ6S545 545 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 YAF2Q8IY57 180 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 SPATA20Q8TB22 786 aa16.14■□□□□ 0.17
LMBR1-220ENST00000609081 MYCBPAPQ8TBZ2 947 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms