RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 GPR15P49685 360 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 PPP2R3AQ06190 1150 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 BFSP1Q12934 665 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 ORC2Q13416 577 aaPredicted RBP17.35■□□□□ 0.37
SSBP4-211ENST00000601614 SPATA1Q5VX52 437 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 CYP2U1Q7Z449 544 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 SPIRE2Q8WWL2 714 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 CD101Q93033 1021 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 ECT2Q9H8V3 914 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 C17orf75Q9HAS0 396 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 DNM3Q9UQ16 869 aa17.35■□□□□ 0.37
SSBP4-211ENST00000601614 ADRB2P07550 413 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 MATR3P43243 847 aaKnown RBP eCLIP17.34■□□□□ 0.37
SSBP4-211ENST00000601614 PSMD2Q13200 908 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 TAF12Q16514 161 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 C9orf57Q5W0N0 161 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 RASSF3Q86WH2 238 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 ACDQ96AP0 544 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 MMTAG2Q9BU76 263 aaKnown RBP17.34■□□□□ 0.37
SSBP4-211ENST00000601614 KIF9Q9HAQ2 790 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 MYOFQ9NZM1 2061 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 NEUROG3Q9Y4Z2 214 aa17.34■□□□□ 0.37
SSBP4-211ENST00000601614 MYO18AQ92614 2054 aaKnown RBP17.33■□□□□ 0.37
SSBP4-211ENST00000601614 PIRO00625 290 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 NFICP08651 508 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 PLS3P13797 630 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 HNRNPLP14866 589 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSBP4-211ENST00000601614 DHPSP49366 369 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-211ENST00000601614 AMPD2Q01433 879 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 MTF1Q14872 753 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 PDGFRLQ15198 375 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 ANKRD1Q15327 319 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 IL17AQ16552 155 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 USP39Q53GS9 565 aaKnown RBP17.33■□□□□ 0.36
SSBP4-211ENST00000601614 SDHAF4Q5VUM1 108 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 ANO7Q6IWH7 933 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 CC2D1AQ6P1N0 951 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-211ENST00000601614 MON1AQ86VX9 555 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 MDGA1Q8NFP4 955 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 PIGKQ92643 395 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 SLC22A12Q96S37 553 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 TMLHEQ9NVH6 421 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 ABI2Q9NYB9 513 aaPredicted RBP17.33■□□□□ 0.36
SSBP4-211ENST00000601614 ZMYM5Q9UJ78 669 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 MSRB2Q9Y3D2 182 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 WNT6Q9Y6F9 365 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 ITPR1Q14643 2758 aa17.33■□□□□ 0.36
SSBP4-211ENST00000601614 SPAARA0A1B0GVQ0 90 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 ANO9A1A5B4 782 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 XPOTO43592 962 aaKnown RBP17.32■□□□□ 0.36
SSBP4-211ENST00000601614 CAPNS1P04632 268 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 GUCY2CP25092 1073 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 DDX6P26196 483 aaKnown RBP eCLIP17.32■□□□□ 0.361e-6■■■■□ 24.4
SSBP4-211ENST00000601614 PDIA5Q14554 519 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 ZNF268Q14587 947 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-211ENST00000601614 ZNF77Q15935 545 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 EML3Q32P44 896 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 CPA6Q8N4T0 437 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 FRMD1Q8N878 549 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 SPPL2BQ8TCT7 592 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 USP33Q8TEY7 942 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 OSCP1Q8WVF1 389 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 TMEM74BQ9NUR3 256 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
SSBP4-211ENST00000601614 LAMA5O15230 3695 aa17.32■□□□□ 0.36
SSBP4-211ENST00000601614 PCDH15Q96QU1 1955 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 PLXNB3Q9ULL4 1909 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 NPHP3-ACAD11A0A0J9YXS1 232 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 USP4Q13107 963 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 SAFBQ15424 915 aaKnown RBP eCLIP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 TRIM61Q5EBN2 209 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 WSCD1Q658N2 575 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 TTC16Q8NEE8 873 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 RLN3Q8WXF3 142 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 FAM212AQ96EL1 285 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 CNOT6LQ96LI5 555 aaKnown RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 CYP2S1Q96SQ9 504 aa17.31■□□□□ 0.36
SSBP4-211ENST00000601614 FOXP1Q9H334 677 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 RPF1Q9H9Y2 349 aaKnown RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 DUS2Q9NX74 493 aaKnown RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 EVLQ9UI08 416 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.31■□□□□ 0.36
SSBP4-211ENST00000601614 K7EQS6 105 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 CYB561D2O14569 222 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 OGTO15294 1046 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 CHRM1P11229 460 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-211ENST00000601614 OPRD1P41143 372 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 MAPK8P45983 427 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
SSBP4-211ENST00000601614 NCKAP1LP55160 1127 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 SEC13P55735 322 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 FAM193AP78312 1265 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 FAM160A1Q05DH4 1040 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 GAB4Q2WGN9 574 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 C2orf27AQ580R0 203 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 SLC39A4Q6P5W5 647 aa17.3■□□□□ 0.36
SSBP4-211ENST00000601614 TMEM92Q6UXU6 159 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms