RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 KIF2BQ8N4N8 673 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 SLC35B2Q8TB61 432 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 DENND1AQ8TEH3 1009 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 TBC1D31Q96DN5 1066 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 MRRFQ96E11 262 aaKnown RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 ZWILCHQ9H900 591 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 SAE1Q9UBE0 346 aaPredicted RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 CPSF3Q9UKF6 684 aaKnown RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 AGTPBP1Q9UPW5 1226 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 AFG3L2Q9Y4W6 797 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 C3orf70A6NLC5 250 aaPredicted RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 BANF1O75531 89 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 EZRP15311 586 aaKnown RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 PSMA2P25787 234 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 RFC1P35251 1148 aaPredicted RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 DNAJC3Q13217 504 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 PTPN20Q4JDL3 420 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
SMG9-211ENST00000601170 DENND1BQ6P3S1 775 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 POLNQ7Z5Q5 900 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 ANKMY2Q8IV38 441 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 RNF149Q8NC42 400 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 SMC6Q96SB8 1091 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 TJP2Q9UDY2 1190 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 MGAMO43451 1857 aa15.22■□□□□ 0.03
SMG9-211ENST00000601170 ABLIM1O14639 778 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 HOXC6P09630 235 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 MARK3P27448 753 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 LACTBP83111 547 aaPredicted RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 OTUD4Q01804 1114 aaKnown RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 SLC25A11Q02978 314 aaKnown RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 LAMTOR4Q0VGL1 99 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 NEDD9Q14511 834 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 SPARCL1Q14515 664 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 MAPK6Q16659 721 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 KCNT1Q5JUK3 1230 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 IER5Q5VY09 327 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 APOBEC3FQ8IUX4 373 aaKnown RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 LRRC71Q8N4P6 559 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 ANKLE1Q8NAG6 615 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 JOSD2Q8TAC2 188 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 ADAM33Q9BZ11 813 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 C10orf88Q9H8K7 445 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 SENP1Q9P0U3 644 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 MCM8Q9UJA3 840 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 STRIP2Q9ULQ0 834 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 FARP1Q9Y4F1 1045 aaPredicted RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 NDC80O14777 642 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 GDF10P55107 478 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 PRKG1Q13976 671 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 SURF1Q15526 300 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 HIF1AQ16665 826 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 EEPD1Q7L9B9 569 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 ACTL9Q8TC94 416 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 XYLT2Q9H1B5 865 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 GRID1Q9ULK0 1009 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 PHTF1Q9UMS5 762 aa15.21■□□□□ 0.03
SMG9-211ENST00000601170 SMG5Q9UPR3 1016 aaKnown RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 BRCA1P38398 1863 aaKnown RBP15.21■□□□□ 0.03
SMG9-211ENST00000601170 ANK1P16157 1881 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 MAGEB2O15479 319 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 LRCH4O75427 683 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 KRT16P08779 473 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 KRT3P12035 628 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CD19P15391 556 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CA4P22748 312 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 IL1R2P27930 398 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CTCFP49711 727 aaPredicted RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 SLC18A1P54219 525 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 GPX6P59796 221 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 OSTNP61366 133 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 GAD2Q05329 585 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 ASRGL1Q7L266 308 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 THNSL1Q8IYQ7 743 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 ARFGAP1Q8N6T3 406 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 THOC1Q96FV9 657 aaKnown RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 ARHGEF3Q9NR81 526 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 PSMC3IPQ9P2W1 217 aaPredicted RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 NXF1Q9UBU9 619 aaKnown RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 SLC24A2Q9UI40 661 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CYTH4Q9UIA0 394 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 POLIQ9UNA4 740 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 TRIM33Q9UPN9 1127 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 STARD13Q9Y3M8 1113 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 SSC5DA1L4H1 1573 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 A0A1W2PPM1 405 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 SOWAHBA6NEL2 793 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CST8O60676 142 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 ITGBL1O95965 494 aaPredicted RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 EDNRBP24530 442 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 POLR2BP30876 1174 aaKnown RBP15.2■□□□□ 0.02
SMG9-211ENST00000601170 RAP1GAPP47736 663 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 CCDC15Q0P6D6 951 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 LY6KQ17RY6 165 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 ANKRD22Q5VYY1 191 aa15.2■□□□□ 0.02
SMG9-211ENST00000601170 METTL7BQ6UX53 244 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms