RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 GJA4P35212 333 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 NOVA1P51513 510 aaKnown RBP18.11■□□□□ 0.49
USE1-208ENST00000600970 KARSQ15046 597 aaKnown RBP18.11■□□□□ 0.49
USE1-208ENST00000600970 FBXO43Q4G163 708 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 WSCD1Q658N2 575 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 CC2D1AQ6P1N0 951 aaPredicted RBP18.11■□□□□ 0.49
USE1-208ENST00000600970 SYT13Q7L8C5 426 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 STKLD1Q8NE28 680 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 EZH1Q92800 747 aaPredicted RBP18.11■□□□□ 0.49
USE1-208ENST00000600970 P2RY13Q9BPV8 354 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 ODF2LQ9ULJ1 636 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 NUP205Q92621 2012 aa18.11■□□□□ 0.49
USE1-208ENST00000600970 BCLAF3A2AJT9 711 aaKnown RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 K7ENM7 598 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 GPR15P49685 360 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 TAF6P49848 677 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 ATP2C1P98194 919 aaPredicted RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 DMC1Q14565 340 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 ZNF268Q14587 947 aaPredicted RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 PDGFRLQ15198 375 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 TMEM119Q4V9L6 283 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 UNQ6494/PRO21346Q6UXR6 183 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 MON1AQ86VX9 555 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 MRPS31Q92665 395 aaKnown RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 CDK5RAP3Q96JB5 506 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 REEP2Q9BRK0 252 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 EBF1Q9UH73 591 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 ZMIZ1Q9ULJ6 1067 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 MAGED2Q9UNF1 606 aaPredicted RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 PCDHB5Q9Y5E4 795 aa18.1■□□□□ 0.49
USE1-208ENST00000600970 CNOT1A5YKK6 2376 aaKnown RBP18.1■□□□□ 0.49
USE1-208ENST00000600970 SOBPA7XYQ1 873 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 APBB3O95704 486 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 SCP2P22307 547 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 ACOT2P49753 483 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 DCP1BQ8IZD4 617 aaKnown RBP18.09■□□□□ 0.49
USE1-208ENST00000600970 MYCT1Q8N699 235 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 CD101Q93033 1021 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 PI4K2AQ9BTU6 479 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 CCSER1Q9C0I3 900 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 ASB7Q9H672 318 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 ECT2Q9H8V3 914 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 SH2B1Q9NRF2 756 aaPredicted RBP18.09■□□□□ 0.49
USE1-208ENST00000600970 TMLHEQ9NVH6 421 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 DPP3Q9NY33 737 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 WASF3Q9UPY6 502 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 C2CD2Q9Y426 696 aa18.09■□□□□ 0.49
USE1-208ENST00000600970 LNP1A1A4G5 178 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 VWA3AA6NCI4 1184 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 ANKRD63C9JTQ0 380 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 TADA3O75528 432 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 CSH1P0DML2 217 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 CSH2P0DML3 217 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 DGKEP52429 567 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 ZNF252P-AS1Q0IIN9 211 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 FOXC1Q12948 553 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 MTF1Q14872 753 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 SDHAF4Q5VUM1 108 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 DAB2IPQ5VWQ8 1189 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 CPA6Q8N4T0 437 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 EXOC4Q96A65 974 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 ACDQ96AP0 544 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 ZSCAN31Q96LW9 406 aaPredicted RBP18.08■□□□□ 0.48
USE1-208ENST00000600970 DUS2Q9NX74 493 aaKnown RBP18.08■□□□□ 0.48
USE1-208ENST00000600970 INVSQ9Y283 1065 aa18.08■□□□□ 0.48
USE1-208ENST00000600970 KPNA7A9QM74 516 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 TRAK2O60296 914 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 PRPF40AO75400 957 aaKnown RBP18.07■□□□□ 0.48
USE1-208ENST00000600970 FAM13AO94988 1023 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 SPINK2P20155 84 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 GBP1P32455 592 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 ZNF131P52739 623 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 FAM160A1Q05DH4 1040 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 PSMD2Q13200 908 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 ZNF77Q15935 545 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 SH3PXD2AQ5TCZ1 1133 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 GPBP1Q86WP2 473 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 KDF1Q8NAX2 398 aaPredicted RBP18.07■□□□□ 0.48
USE1-208ENST00000600970 LRRC15Q8TF66 581 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 OSCP1Q8WVF1 389 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 FIZ1Q96SL8 496 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 TMEM121BQ9BXQ6 578 aaPredicted RBP18.07■□□□□ 0.48
USE1-208ENST00000600970 PARVGQ9HBI0 331 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 THADAQ6YHU6 1953 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 ANAPC1Q9H1A4 1944 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 ASPMQ8IZT6 3477 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 CHD6Q8TD26 2715 aa18.07■□□□□ 0.48
USE1-208ENST00000600970 TISP43B9A030 160 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 GTF2BQ00403 316 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 USP4Q13107 963 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 DHX8Q14562 1220 aaKnown RBP18.06■□□□□ 0.48
USE1-208ENST00000600970 SV2CQ496J9 727 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 RILPL1Q5EBL4 403 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 PMS2CLQ68D20 193 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 ADALQ6DHV7 355 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 EFCAB13Q8IY85 973 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 ATP2A3Q93084 1043 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 SLC22A12Q96S37 553 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 CYP2S1Q96SQ9 504 aa18.06■□□□□ 0.48
USE1-208ENST00000600970 UXTQ9UBK9 157 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms