RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ACOT1Q86TX2 421 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 MYCBPAPQ8TBZ2 947 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 SPAG5Q96R06 1193 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 LPIN3Q9BQK8 851 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 EMILIN2Q9BXX0 1053 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 TMLHEQ9NVH6 421 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 GTF3C4Q9UKN8 822 aa13.47□□□□□ -0.25
CHMP2A-206ENST00000600118 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 CYP26A1O43174 497 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 CSPG5O95196 566 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 VNN2O95498 520 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 KRT5P13647 590 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 CASP14P31944 242 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 ZBED6P86452 979 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 SMARCB1Q12824 385 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 MAPRE1Q15691 268 aaKnown RBP13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 NFE2Q16621 373 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 TPGS2Q68CL5 300 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 ARHGAP17Q68EM7 881 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 ADGRD2Q7Z7M1 963 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 C12orf29Q8N999 325 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 TFAP2BQ92481 460 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 MYLPFQ96A32 169 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 AIPL1Q9NZN9 384 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 KIAA1257Q9ULG3 409 aa13.46□□□□□ -0.25
CHMP2A-206ENST00000600118 COL4A4P53420 1690 aaPredicted RBP13.46□□□□□ -0.26
CHMP2A-206ENST00000600118 MTMR11A4FU01 709 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 LRRC53A6NM62 1247 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 CLASP2O75122 1294 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 GFPT2O94808 682 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 ADH1AP07327 375 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 VDRP11473 427 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 CPB1P15086 417 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 HNRNPH3P31942 346 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 USP8P40818 1118 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 DUSP6Q16828 381 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 SLC39A12Q504Y0 691 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 MDH1BQ5I0G3 518 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 PAQR9Q6ZVX9 377 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 IRF2BP2Q7Z5L9 587 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 PPFIBP1Q86W92 1011 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 FUKQ8N0W3 1084 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 SLC22A17Q8WUG5 538 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 CPLX3Q8WVH0 158 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 SYN2Q92777 582 aaPredicted RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 PCED1BQ96HM7 432 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 HEXIM2Q96MH2 286 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 HNRNPABQ99729 332 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 B3GNT5Q9BYG0 378 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 DNAI2Q9GZS0 605 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 ABCB6Q9NP58 842 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 ACP6Q9NPH0 428 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 MAFFQ9ULX9 164 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 LUC7L2Q9Y383 392 aaKnown RBP13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 MTCH2Q9Y6C9 303 aa13.45□□□□□ -0.26
CHMP2A-206ENST00000600118 O00370 1275 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 TGM5O43548 720 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 MFAP3LO75121 409 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CALCAP01258 141 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CCDC130P13994 396 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 ATF2P15336 505 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CYP11B1P15538 503 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 FERP16591 822 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 KLRC2P26717 231 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CA8P35219 290 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 KRT9P35527 623 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 PRKCIP41743 596 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CLCN4P51793 760 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 ARPP19P56211 112 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 BPIFB4P59827 614 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 PTK2Q05397 1052 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 KCNC3Q14003 757 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CFAP221Q4G0U5 840 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 SGO2Q562F6 1265 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 Q7L0L9 218 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 SLC47A2Q86VL8 602 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 FMNL3Q8IVF7 1028 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 GLYCTKQ8IVS8 523 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 ATAD1Q8NBU5 361 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 ZNF397Q8NF99 534 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 EPS8L1Q8TE68 723 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 C2orf15Q8WU43 125 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 DDX1Q92499 740 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 FUBP3Q96I24 572 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 DNAJC7Q99615 494 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CDCA3Q99618 268 aaPredicted RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 CRISPLD1Q9H336 500 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 TLE6Q9H808 572 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 FAM49BQ9NUQ9 324 aa13.44□□□□□ -0.26
CHMP2A-206ENST00000600118 HSFX1Q9UBD0 423 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms