RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 WDR49Q8IV35 697 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 XXYLT1Q8NBI6 393 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 KIAA0895Q8NCT3 520 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 SPPL2BQ8TCT7 592 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 PLEKHO2Q8TD55 490 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 SHDQ96IW2 340 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 DDX23Q9BUQ8 820 aaKnown RBP14.77□□□□□ -0.05
SCAF1-203ENST00000598359 TRMT61BQ9BVS5 477 aaKnown RBP14.77□□□□□ -0.05
SCAF1-203ENST00000598359 SMG9Q9H0W8 520 aaKnown RBP14.77□□□□□ -0.05
SCAF1-203ENST00000598359 IL21Q9HBE4 155 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 KIAA1586Q9HCI6 787 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 EXOC1Q9NV70 894 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 HPSEQ9Y251 543 aa14.77□□□□□ -0.05
SCAF1-203ENST00000598359 MYBPHLA2RUH7 354 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 SHISA7A6NL88 538 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 FAM170BA6NMN3 283 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PRPF40AO75400 957 aaKnown RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 CST3P01034 146 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PSMC3P17980 439 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 CYP2F1P24903 491 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 LMO2P25791 158 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PSMC1P62191 440 aaKnown RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PRKCQQ04759 706 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 MYO1EQ12965 1108 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 VEPH1Q14D04 833 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PSMD6Q15008 389 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 SURF1Q15526 300 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 TAF12Q16514 161 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 DDR2Q16832 855 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 KNOP1Q1ED39 458 aaKnown RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 INTS6LQ5JSJ4 861 aaKnown RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 ARID3BQ8IVW6 561 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 TMEM86AQ8N2M4 240 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 KBTBD7Q8WVZ9 684 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 ZNF516Q92618 1163 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 NKD2Q969F2 451 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 ELMO3Q96BJ8 720 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 LRRC3BQ96PB8 259 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 FNBP1Q96RU3 617 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 PKMYT1Q99640 499 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 CGRRF1Q99675 332 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 ACBD6Q9BR61 282 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 GOLPH3LQ9H4A5 285 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 TRPV4Q9HBA0 871 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 LTB4R2Q9NPC1 389 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 HSFX1Q9UBD0 423 aa14.76□□□□□ -0.05
SCAF1-203ENST00000598359 MAGED2Q9UNF1 606 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 R3HCC1Q9Y3T6 440 aaKnown RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 EP300Q09472 2414 aaPredicted RBP14.76□□□□□ -0.05
SCAF1-203ENST00000598359 GABRDO14764 452 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 EXOC3O60645 756 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 PRAMEF12O95522 483 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 PDGFRBP09619 1106 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 HMGA1P17096 107 aaKnown RBP14.75□□□□□ -0.05
SCAF1-203ENST00000598359 TARSP26639 723 aaKnown RBP14.75□□□□□ -0.05
SCAF1-203ENST00000598359 SYKP43405 635 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 MYL7Q01449 175 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 MFSD6LQ8IWD5 586 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 ADSSL1Q8N142 457 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 TOP6BLQ8N6T0 577 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 FSIP1Q8NA03 581 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 TTC8Q8TAM2 541 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 C2orf15Q8WU43 125 aaKnown RBP14.75□□□□□ -0.05
SCAF1-203ENST00000598359 ZFYVE19Q96K21 471 aa14.75□□□□□ -0.05
SCAF1-203ENST00000598359 NDRG2Q9UN36 371 aaKnown RBP14.75□□□□□ -0.05
SCAF1-203ENST00000598359 TPRP12270 2363 aaKnown RBP14.74□□□□□ -0.05
SCAF1-203ENST00000598359 EPG5Q9HCE0 2579 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 ZNF263O14978 683 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 RPN1P04843 607 aaKnown RBP14.74□□□□□ -0.05
SCAF1-203ENST00000598359 SMARCB1Q12824 385 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 GSE1Q14687 1217 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 NFE2Q16621 373 aaPredicted RBP14.74□□□□□ -0.05
SCAF1-203ENST00000598359 ARHGAP15Q53QZ3 475 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 LIMS2Q7Z4I7 341 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 TMEM150AQ86TG1 271 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 C12orf56Q8IXR9 622 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 DNASE1L2Q92874 299 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 IRF7Q92985 503 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 MMS19Q96T76 1030 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 SYT15Q9BQS2 421 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 MRPL45Q9BRJ2 306 aaKnown RBP14.74□□□□□ -0.05
SCAF1-203ENST00000598359 SLC46A2Q9BY10 475 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 GPR88Q9GZN0 384 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 NME7Q9Y5B8 376 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 R4GN57 208 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 COL4A2P08572 1712 aa14.74□□□□□ -0.05
SCAF1-203ENST00000598359 KMT2BQ9UMN6 2715 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 FRYLO94915 3013 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 TICRRQ7Z2Z1 1910 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 PCSK1P29120 753 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 CDC25CP30307 473 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 DEKP35659 375 aaKnown RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 SOX9P48436 509 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 LHX1P48742 406 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 MYL6P60660 151 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 SNRPFP62306 86 aaKnown RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 SPATA2LQ8IUW3 424 aaPredicted RBP14.73□□□□□ -0.05
SCAF1-203ENST00000598359 C1orf210Q8IVY1 113 aa14.73□□□□□ -0.05
SCAF1-203ENST00000598359 SCN4BQ8IWT1 228 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms