RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 DNASE1L2Q92874 299 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 IRF7Q92985 503 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 RSPRY1Q96DX4 576 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 PKMYT1Q99640 499 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 CGRRF1Q99675 332 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 OSBPL6Q9BZF3 934 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 GZF1Q9H116 711 aaPredicted RBP16.17■□□□□ 0.18
LIG1-215ENST00000597901 TRPV5Q9NQA5 729 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 EXOC1Q9NV70 894 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 DMAC2Q9NW81 257 aa16.17■□□□□ 0.18
LIG1-215ENST00000597901 SCN1AP35498 2009 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 A0A1W2PQ27 194 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 A0A1W2PQ64 194 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 A0A1W2PQD8 194 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 SHISA7A6NL88 538 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 PROB1E7EW31 1015 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 ZNF263O14978 683 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 ATP2C2O75185 946 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 F11P03951 625 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 FAM163BP0C2L3 166 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 HMGA1P17096 107 aaKnown RBP16.16■□□□□ 0.18
LIG1-215ENST00000597901 CYP2F1P24903 491 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 PCSK1P29120 753 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 NBL1P41271 181 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 GPR15P49685 360 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 UBXN2BQ14CS0 331 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 DDR2Q16832 855 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 ARHGAP15Q53QZ3 475 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 FAM171BQ6P995 826 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 ZNF852Q6ZMS4 543 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 TPRG1Q6ZUI0 275 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 KBTBD7Q8WVZ9 684 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 LRRC3BQ96PB8 259 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 MMS19Q96T76 1030 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 SLC46A2Q9BY10 475 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 KCTD10Q9H3F6 313 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 TASP1Q9H6P5 420 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 ABCB6Q9NP58 842 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 LTB4R2Q9NPC1 389 aa16.16■□□□□ 0.18
LIG1-215ENST00000597901 PIEZO1Q92508 2521 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 WDFY4Q6ZS81 3184 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 PDXKO00764 312 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 RPN1P04843 607 aaKnown RBP16.15■□□□□ 0.18
LIG1-215ENST00000597901 PDGFRBP09619 1106 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 WARSP23381 471 aaKnown RBP16.15■□□□□ 0.18
LIG1-215ENST00000597901 WEE1P30291 646 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 CDC25CP30307 473 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 RPL10AP62906 217 aaKnown RBP16.15■□□□□ 0.18
LIG1-215ENST00000597901 CYP4F8P98187 520 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 SDHAF4Q5VUM1 108 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 SPATA2LQ8IUW3 424 aaPredicted RBP16.15■□□□□ 0.18
LIG1-215ENST00000597901 SLC9A9Q8IVB4 645 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 C1orf210Q8IVY1 113 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 YAF2Q8IY57 180 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 FSIP1Q8NA03 581 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 PLEKHO2Q8TD55 490 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 TMEM174Q8WUU8 243 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 BCO2Q9BYV7 579 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 GDPD2Q9HCC8 539 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 CDH9Q9ULB4 789 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 NCANO14594 1321 aa16.15■□□□□ 0.18
LIG1-215ENST00000597901 ANK1P16157 1881 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 MAN2B1O00754 1011 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 DPYSL4O14531 572 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 CHADO15335 359 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 CSH1P0DML2 217 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 CSH2P0DML3 217 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 TARSP26639 723 aaKnown RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 GNL1P36915 607 aaPredicted RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 CASP4P49662 377 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 NLRP12P59046 1061 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 FCHO2Q0JRZ9 810 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 FZD5Q13467 585 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 TRPC3Q13507 836 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 BECN1Q14457 450 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 CCDC142Q17RM4 750 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 WDR72Q3MJ13 1102 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 KRBA2Q6ZNG9 492 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 FRMD5Q7Z6J6 570 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 TMEM150AQ86TG1 271 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 PARD3BQ8TEW8 1205 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 CLDN23Q96B33 292 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 SYT15Q9BQS2 421 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 MRPL45Q9BRJ2 306 aaKnown RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 GOLPH3LQ9H4A5 285 aa16.14■□□□□ 0.17
LIG1-215ENST00000597901 MAGEC2Q9UBF1 373 aaPredicted RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 MAGED2Q9UNF1 606 aaPredicted RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 MRPS17Q9Y2R5 130 aaKnown RBP16.14■□□□□ 0.17
LIG1-215ENST00000597901 ARNTLO00327 626 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 NCAM2O15394 837 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 PHACTR2O75167 634 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 TACC1O75410 805 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 ZNF202O95125 648 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 STAU1O95793 577 aaKnown RBP16.13■□□□□ 0.17
LIG1-215ENST00000597901 C4BPAP04003 597 aaKnown RBP16.13■□□□□ 0.17
LIG1-215ENST00000597901 AP3M2P53677 418 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 MYL6P60660 151 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 CLDN10P78369 228 aa16.13■□□□□ 0.17
LIG1-215ENST00000597901 DPYDQ12882 1025 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms