RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 MESP2Q0VG99 397 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 KCNH2Q12809 1159 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 NR1H3Q13133 447 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 HDAC1Q13547 482 aaPredicted RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 RTP5Q14D33 572 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 B4GALNT3Q6L9W6 998 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 MAEAQ7L5Y9 396 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TMPRSS12Q86WS5 348 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TPH2Q8IWU9 490 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 SPACA3Q8IXA5 215 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 RGL4Q8IZJ4 473 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TMEM130Q8N3G9 435 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 ZNF513Q8N8E2 541 aaPredicted RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 SNIP1Q8TAD8 396 aaKnown RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 BICD2Q8TD16 824 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 GIPC2Q8TF65 315 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 LRRC15Q8TF66 581 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 SPIRE2Q8WWL2 714 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TTC9Q92623 222 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 C18orf25Q96B23 403 aaPredicted RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 CYP2S1Q96SQ9 504 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 ADPGKQ9BRR6 497 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 ZDHHC5Q9C0B5 715 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 POLR3FQ9H1D9 316 aaPredicted RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 GAREM1Q9H706 876 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 ZDHHC4Q9NPG8 344 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 GPRC5CQ9NQ84 441 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TM7SF3Q9NS93 570 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 BTBD3Q9Y2F9 522 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 RBM8AQ9Y5S9 174 aaKnown RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 WNT6Q9Y6F9 365 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 TNRC6BQ9UPQ9 1833 aaKnown RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 CABIN1Q9Y6J0 2220 aa7.05□□□□□ -1.28
DNMT1-222ENST00000590619 HELZP42694 1942 aaKnown RBP7.05□□□□□ -1.28
DNMT1-222ENST00000590619 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 TCRBV21S2A2A0A5A6 115 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 LRRIQ4A6NIV6 560 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 M0QZQ0 153 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 PRPF3O43395 683 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 SLC37A4O43826 429 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CILPO75339 1184 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 LARGE1O95461 756 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ZNF883P0CG24 379 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 GP1BBP13224 206 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 JUPP14923 745 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 KCNE1P15382 129 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 GNSP15586 552 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 GABRG2P18507 467 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ATF6P18850 670 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CHMLP26374 656 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 NMT1P30419 496 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 MCM4P33991 863 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CCR10P46092 362 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CLDN6P56747 220 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 EXOSC10Q01780 885 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CCDC173Q0VFZ6 552 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ZNF268Q14587 947 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 MTF1Q14872 753 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 TMEM132AQ24JP5 1023 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 HLA-BQ31612 363 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 PREPLQ4J6C6 727 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CCDC157Q569K6 752 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 EOGTQ5NDL2 527 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 NT5DC1Q5TFE4 455 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ARHGAP40Q5TG30 622 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CDCA2Q69YH5 1023 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 MON1AQ86VX9 555 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CHD1LQ86WJ1 897 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 EFCAB13Q8IY85 973 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CEP120Q8N960 986 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 CCDC12Q8WUD4 166 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 BAP1Q92560 729 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 HAS1Q92839 578 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ATP2A3Q93084 1043 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 NXPE2Q96DL1 559 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 MED8Q96G25 268 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 FAM20AQ96MK3 541 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 HSPA12BQ96MM6 686 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 OXCT2Q9BYC2 517 aaPredicted RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 TRIM4Q9C037 500 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 KIF9Q9HAQ2 790 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ANKEF1Q9NU02 776 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 SLC38A7Q9NVC3 462 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 DDX25Q9UHL0 483 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 ZMYM5Q9UJ78 669 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 FNDC3AQ9Y2H6 1198 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 PCDHGB2Q9Y5G2 931 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 SPTAN1Q13813 2472 aaKnown RBP7.04□□□□□ -1.28
DNMT1-222ENST00000590619 KNL1Q8NG31 2342 aa7.04□□□□□ -1.28
DNMT1-222ENST00000590619 AHCTF1Q8WYP5 2266 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 OR6C75A6NL08 312 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 TRIM66O15016 1216 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 SGSM2O43147 1006 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 HMGA1P17096 107 aaKnown RBP7.03□□□□□ -1.28
DNMT1-222ENST00000590619 LIG1P18858 919 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 DDX6P26196 483 aaKnown RBP eCLIP7.03□□□□□ -1.28
DNMT1-222ENST00000590619 IFNAR2P48551 515 aa7.03□□□□□ -1.28
DNMT1-222ENST00000590619 TUFMP49411 452 aaKnown RBP7.03□□□□□ -1.28
DNMT1-222ENST00000590619 RARRES1P49788 294 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms