RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 VDRP11473 427 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 RPL17P18621 184 aaKnown RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 CDC25BP30305 580 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 CA8P35219 290 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 SOX5P35711 763 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 USP8P40818 1118 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 ZBED6P86452 979 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 PTK2Q05397 1052 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 LILRA6Q6PI73 481 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 C4orf50Q6ZRC1 276 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 RTL10Q7L3V2 364 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 ACOT1Q86TX2 421 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 RBBP8NLQ8NC74 664 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 HDAC7Q8WUI4 952 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 BAP1Q92560 729 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 SYN2Q92777 582 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 TWNKQ96RR1 684 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 GAS2L1Q99501 681 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 NSUN3Q9H649 340 aaKnown RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 CRTAC1Q9NQ79 661 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 HSFX1Q9UBD0 423 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 AFF4Q9UHB7 1163 aaKnown RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 DPP7Q9UHL4 492 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 VWA8A3KMH1 1905 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 CYP26A1O43174 497 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 HCRTO43612 131 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 NCK2O43639 380 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CLASP2O75122 1294 aaKnown RBP12.94□□□□□ -0.34
DNMT1-218ENST00000589294 GYPCP04921 128 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CPB1P15086 417 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ATF2P15336 505 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CLCN1P35523 988 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ARPP19P56211 112 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ROR1Q01973 937 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 TBX2Q13207 712 aaPredicted RBP12.94□□□□□ -0.34
DNMT1-218ENST00000589294 STILQ15468 1287 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CNGA2Q16280 664 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 SLC39A12Q504Y0 691 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ZNF394Q53GI3 561 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ARHGAP17Q68EM7 881 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 PALB2Q86YC2 1186 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 SPPL2BQ8TCT7 592 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CPLX3Q8WVH0 158 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 CYFIP2Q96F07 1278 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 FUBP3Q96I24 572 aaKnown RBP eCLIP12.94□□□□□ -0.34
DNMT1-218ENST00000589294 TMEM209Q96SK2 561 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 DPEP3Q9H4B8 488 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 ABCB6Q9NP58 842 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 AIPL1Q9NZN9 384 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 HMGXB4Q9UGU5 601 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 PCDHB5Q9Y5E4 795 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 PCDHGC5Q9Y5F6 944 aa12.94□□□□□ -0.34
DNMT1-218ENST00000589294 WDR27A2RRH5 827 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 MED7O43513 233 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 TGM5O43548 720 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 FERP16591 822 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 CASP14P31944 242 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 ELF1P32519 619 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 TUFMP49411 452 aaKnown RBP12.93□□□□□ -0.34
DNMT1-218ENST00000589294 FXR1P51114 621 aaKnown RBP eCLIP12.93□□□□□ -0.34
DNMT1-218ENST00000589294 CLCN4P51793 760 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 PSMC1P62191 440 aaKnown RBP12.93□□□□□ -0.34
DNMT1-218ENST00000589294 ADGRE1Q14246 886 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 DUSP6Q16828 381 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 CFAP221Q4G0U5 840 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 SGO2Q562F6 1265 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 MDH1BQ5I0G3 518 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 ELMSAN1Q6PJG2 1045 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 RNF19BQ6ZMZ0 732 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 TMC6Q7Z403 805 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 IRF2BP2Q7Z5L9 587 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 SPATA2LQ8IUW3 424 aaPredicted RBP12.93□□□□□ -0.34
DNMT1-218ENST00000589294 DRC7Q8IY82 874 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 TCEAL8Q8IYN2 117 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 C12orf29Q8N999 325 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 SLC22A17Q8WUG5 538 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 PCED1BQ96HM7 432 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 FAM161BQ96MY7 647 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 HNRNPABQ99729 332 aaKnown RBP12.93□□□□□ -0.34
DNMT1-218ENST00000589294 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 PLEKHA4Q9H4M7 779 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 TMLHEQ9NVH6 421 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 IMPACTQ9P2X3 320 aa12.93□□□□□ -0.34
DNMT1-218ENST00000589294 ATP8B3O60423 1300 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 LRRC53A6NM62 1247 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 PER2O15055 1255 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 GFPT2O94808 682 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 GLUD1P00367 558 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 CD19P15391 556 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 IGFBP4P22692 258 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 GNA15P30679 374 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 HNRNPH3P31942 346 aaKnown RBP12.92□□□□□ -0.34
DNMT1-218ENST00000589294 KRT9P35527 623 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 MAGEA11P43364 429 aa12.92□□□□□ -0.34
DNMT1-218ENST00000589294 NRIP1P48552 1158 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms