RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 NBL1P41271 181 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 VAMP7P51809 220 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 CLDN10P78369 228 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 ADAM9Q13443 819 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 SNW1Q13573 536 aaKnown RBP12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 NCOA4Q13772 614 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 SOWAHAQ2M3V2 549 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 WDR72Q3MJ13 1102 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 CFAP221Q4G0U5 840 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 SIX5Q8N196 739 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 ENGASEQ8NFI3 743 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 ITFG1Q8TB96 612 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 E2F7Q96AV8 911 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 BORCS6Q96GS4 357 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 CEP295NLQ96MC4 621 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 VRTNQ9H8Y1 702 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 CFAP54Q96N23 3096 aa12.55□□□□□ -0.4
PRKCSH-207ENST00000588269 BICDL2A1A5D9 508 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 GABRDO14764 452 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 ECI2O75521 394 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 CSH1P0DML2 217 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 CSH2P0DML3 217 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 HAPLN1P10915 354 aaPredicted RBP12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 CEBPBP17676 345 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 ANXA13P27216 316 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 GTF2H1P32780 548 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 NUBP1P53384 320 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 FKBP3Q00688 224 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 SLC5A9Q2M3M2 681 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 SGSM1Q2NKQ1 1148 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 TDRD10Q5VZ19 366 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 VSTM1Q6UX27 236 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 ADSSL1Q8N142 457 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 OR6B3Q8NGW1 331 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 SPATA20Q8TB22 786 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 SHDQ96IW2 340 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 TNIP3Q96KP6 325 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 TMEM209Q96SK2 561 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 RTP3Q9BQQ7 232 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 ZFP14Q9HCL3 533 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 CEP72Q9P209 647 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 NXF1Q9UBU9 619 aaKnown RBP12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 WNT16Q9UBV4 365 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 CA14Q9ULX7 337 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 SLC27A5Q9Y2P5 690 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
PRKCSH-207ENST00000588269 DOCK8Q8NF50 2099 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 KRBA1A5PL33 1030 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 A8MXQ7 604 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 DPYSL4O14531 572 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 TRIM66O15016 1216 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 AOC1P19801 751 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 DDX6P26196 483 aaKnown RBP eCLIP12.53□□□□□ -0.46e-7■□□□□ 8.8
PRKCSH-207ENST00000588269 MAGEA11P43364 429 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 CASP4P49662 377 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 PDE6CP51160 858 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 MYL6P60660 151 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ANGPT1Q15389 498 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ZACNQ401N2 412 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 SMYD4Q8IYR2 804 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 SLC44A3Q8N4M1 653 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 DEPDC1BQ8WUY9 529 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 SMARCD2Q92925 531 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 NKD2Q969F2 451 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ELSPBP1Q96BH3 223 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 DHTKD1Q96HY7 919 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 ELOVL4Q9GZR5 314 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 IRF2BPLQ9H1B7 796 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 SLC2A4RGQ9NR83 387 aa12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 MAGEC2Q9UBF1 373 aaPredicted RBP12.53□□□□□ -0.4
PRKCSH-207ENST00000588269 A0A1W2PRU2 124 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 SOBPA7XYQ1 873 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 GOLGA6L22H0YM25 854 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 STK25O00506 426 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 AKAP3O75969 853 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 VNN2O95498 520 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 GABRR2P28476 465 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 GNL1P36915 607 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 PRCPP42785 496 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 MXI1P50539 228 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 CLCN5P51795 746 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 CYP27A1Q02318 531 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 KRT39Q6A163 491 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 PARM1Q6UWI2 310 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 LIMS2Q7Z4I7 341 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 DNAJB7Q7Z6W7 309 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 TMC8Q8IU68 726 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 YAF2Q8IY57 180 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 CCDC105Q8IYK2 499 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 TTC39CQ8N584 583 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 TRIML1Q8N9V2 468 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 ZSCAN18Q8TBC5 510 aaPredicted RBP12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 MRPS31Q92665 395 aaKnown RBP12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 FGF14Q92915 247 aa12.52□□□□□ -0.41
PRKCSH-207ENST00000588269 MYLPFQ96A32 169 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms