RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 FSTL4Q6MZW2 842 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 CACNA2D4Q7Z3S7 1137 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 GAB3Q8WWW8 586 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 POMGNT1Q8WZA1 660 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 DDX1Q92499 740 aaKnown RBP15.15■□□□□ 0.02
DNMT1-213ENST00000587604 HVCN1Q96D96 273 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 ZNF560Q96MR9 790 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 EBF3Q9H4W6 596 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 KIF9Q9HAQ2 790 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 HPS4Q9NQG7 708 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 TDP1Q9NUW8 608 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 SMC3Q9UQE7 1217 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 CCL26Q9Y258 94 aa15.15■□□□□ 0.02
DNMT1-213ENST00000587604 AXIN1O15169 862 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 PRPF40AO75400 957 aaKnown RBP15.14■□□□□ 0.01
DNMT1-213ENST00000587604 RPP40O75818 363 aaKnown RBP15.14■□□□□ 0.01
DNMT1-213ENST00000587604 CSH1P0DML2 217 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 CSH2P0DML3 217 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 TSPY1Q01534 308 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 SF3A1Q15459 793 aaKnown RBP15.14■□□□□ 0.01
DNMT1-213ENST00000587604 TXNDC8Q6A555 127 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 TRIM68Q6AZZ1 485 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 CC2D1AQ6P1N0 951 aaPredicted RBP15.14■□□□□ 0.01
DNMT1-213ENST00000587604 PKN3Q6P5Z2 889 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 MON1AQ86VX9 555 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 MRPS31Q92665 395 aaKnown RBP15.14■□□□□ 0.01
DNMT1-213ENST00000587604 CHFRQ96EP1 664 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 ACBD6Q9BR61 282 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 STRA6Q9BX79 667 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 TMLHEQ9NVH6 421 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 SLC8A2Q9UPR5 921 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 EML5Q05BV3 1969 aa15.14■□□□□ 0.01
DNMT1-213ENST00000587604 PPP1R37O75864 691 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 KRT37O76014 449 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 CD2BP2O95400 341 aaKnown RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ZNF806P0C7X5 589 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 RAP1GAPP47736 663 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 PXNP49023 591 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 LIMK1P53667 647 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ZNF268Q14587 947 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 PDGFRLQ15198 375 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 DYMQ7RTS9 669 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 SFR1Q86XK3 245 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 PDCL2Q8N4E4 241 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 CAMKK1Q8N5S9 505 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 CACTINQ8WUQ7 758 aaKnown RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 LEO1Q8WVC0 666 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ARRDC1-AS1Q9H2J1 176 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ABCB6Q9NP58 842 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 UXTQ9UBK9 157 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 SEL1LQ9UBV2 794 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 MAGED2Q9UNF1 606 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 EXOC7Q9UPT5 735 aa15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.13■□□□□ 0.01
DNMT1-213ENST00000587604 ANAPC1Q9H1A4 1944 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 AKAP3O75969 853 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 EPN2O95208 641 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 CCDC192P0DO97 292 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 DRD1P21728 446 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 POLR2BP30876 1174 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 GPR15P49685 360 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 GALK1P51570 392 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 RPL10AP62906 217 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 TFAMQ00059 246 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 AASDHQ4L235 1098 aaPredicted RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 IL31Q6EBC2 164 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 KBTBD6Q86V97 674 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 TMEM86AQ8N2M4 240 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 C12orf50Q8NA57 414 aaPredicted RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 EXOC4Q96A65 974 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 TRMT2BQ96GJ1 504 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 EPSTI1Q96J88 318 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 MYRFLQ96LU7 910 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 FAM213AQ9BRX8 229 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 MRPL44Q9H9J2 332 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 FBRSL1Q9HCM7 1045 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 DDX43Q9NXZ2 648 aaKnown RBP15.12■□□□□ 0.01
DNMT1-213ENST00000587604 STK17AQ9UEE5 414 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 CCDC39Q9UFE4 941 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 AGAP1Q9UPQ3 857 aa15.12■□□□□ 0.01
DNMT1-213ENST00000587604 USP24Q9UPU5 2620 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 TM4SF5O14894 197 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 HUS1O60921 280 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 RNF40O75150 1001 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 NOL4O94818 638 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 LDHAP00338 332 aaKnown RBP15.11■□□□□ 0.01
DNMT1-213ENST00000587604 EGFP01133 1207 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 ITGB3P05106 788 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 ARSAP15289 507 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 GAP43P17677 238 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 CYP2F1P24903 491 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 WNT7BP56706 349 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 MYL7Q01449 175 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 KCNA1Q09470 495 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 SF3A2Q15428 464 aaKnown RBP15.11■□□□□ 0.01
DNMT1-213ENST00000587604 DDR2Q16832 855 aa15.11■□□□□ 0.01
DNMT1-213ENST00000587604 FBXO43Q4G163 708 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms