RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 HOXA6P31267 233 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 OR1D2P34982 312 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 RAP1GAPP47736 663 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 NOVA1P51513 510 aaKnown RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 KRT85P78386 507 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 AMPD3Q01432 767 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 PPP2R3AQ06190 1150 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 FOXC1Q12948 553 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 SEZ6Q53EL9 994 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 PRSS36Q5K4E3 855 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 L1TD1Q5T7N2 865 aaKnown RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 SLFN12LQ6IEE8 588 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 METTL3Q86U44 580 aaKnown RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 WDR5BQ86VZ2 330 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 CCDC65Q8IXS2 484 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 C3orf58Q8NDZ4 430 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 DHX58Q96C10 678 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 ASB16Q96NS5 453 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 TSPAN18Q96SJ8 248 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 MSTO1Q9BUK6 570 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 TRIM9Q9C026 710 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 SMOC1Q9H4F8 434 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 GOLGA2P5Q9HBQ8 144 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 RBM12Q9NTZ6 932 aaKnown RBP10.03□□□□□ -0.8
SDF2-203ENST00000585749 PANK4Q9NVE7 773 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 FAM13BQ9NYF5 915 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 ATP6V1DQ9Y5K8 247 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 STYXL1Q9Y6J8 313 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 TCHHQ07283 1943 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 NCANO14594 1321 aa10.03□□□□□ -0.8
SDF2-203ENST00000585749 TAF4O00268 1085 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 PODXLO00592 558 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 POLR2DO15514 142 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 TRAPPC3O43617 180 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 GCNT3O95395 438 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 TOP3BO95985 862 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 CYP3A5P20815 502 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 FGFR3P22607 806 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 RPL9P32969 192 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 TNFSF9P41273 254 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 CASP5P51878 434 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 POU5F1Q01860 360 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 ZNF252P-AS1Q0IIN9 211 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 LRRC32Q14392 662 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 ENOX2Q16206 610 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 RNF43Q68DV7 783 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 CD300LGQ6UXG3 332 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 CD302Q8IX05 232 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 LEO1Q8WVC0 666 aaPredicted RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 TCEAL4Q96EI5 215 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 ACCSQ96QU6 501 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 RPF1Q9H9Y2 349 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 MTRRQ9UBK8 725 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 CPSF3Q9UKF6 684 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 EXOC7Q9UPT5 735 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 CDY1Q9Y6F8 540 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 EML5Q05BV3 1969 aa10.02□□□□□ -0.81
SDF2-203ENST00000585749 FLNBO75369 2602 aaKnown RBP10.02□□□□□ -0.81
SDF2-203ENST00000585749 WDR27A2RRH5 827 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TISP43B9A030 160 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ANKRD63C9JTQ0 380 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 XPOTO43592 962 aaKnown RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 MICAL2O94851 1124 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 PTPN2P17706 415 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 LRPAP1P30533 357 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 CCR2P41597 374 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 MLLT6P55198 1093 aaPredicted RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 ASIC1P78348 528 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 KCNA1Q09470 495 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 POSTNQ15063 836 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ZBTB6Q15916 424 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ADALQ6DHV7 355 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 STXBP4Q6ZWJ1 553 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 CACNA2D4Q7Z3S7 1137 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 KBTBD6Q86V97 674 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 DEPDC1BQ8WUY9 529 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 GAB3Q8WWW8 586 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ZCCHC14Q8WYQ9 949 aaKnown RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 SMARCD2Q92925 531 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TCEAL3Q969E4 200 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 C18orf25Q96B23 403 aaPredicted RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 MSANTD3Q96H12 275 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 SPATA32Q96LK8 384 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ZSWIM3Q96MP5 696 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 C7orf25Q9BPX7 421 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 SCNM1Q9BWG6 230 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 FGFBP2Q9BYJ0 223 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 SCAND2PQ9GZW5 306 aaPredicted RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 ASB7Q9H672 318 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TMEM206Q9H813 350 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TBC1D7Q9P0N9 293 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 TUBGCP4Q9UGJ1 667 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 AGO2Q9UKV8 859 aaKnown RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 UBQLN1Q9UMX0 589 aaKnown RBP10.01□□□□□ -0.81
SDF2-203ENST00000585749 PCDHGA5Q9Y5G8 931 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 FREM2Q5SZK8 3169 aa10.01□□□□□ -0.81
SDF2-203ENST00000585749 ASH1LQ9NR48 2969 aaKnown RBP10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms