RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 ZNF585AQ6P3V2 769 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 MMS22LQ6ZRQ5 1243 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 USP50Q70EL3 339 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 LIMS2Q7Z4I7 341 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RASSF3Q86WH2 238 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PLA2G15Q8NCC3 412 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 DNERQ8NFT8 737 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ZFP28Q8NHY6 868 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ZSWIM3Q96MP5 696 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PRKRIP1Q9H875 184 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CERS4Q9HA82 394 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 KCND1Q9NSA2 647 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 HACL1Q9UJ83 578 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PHTF1Q9UMS5 762 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 INSL6Q9Y581 213 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PDS5AQ29RF7 1337 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 UBA6A0AVT1 1052 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 KLRG2A4D1S0 409 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PRPF3O43395 683 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PHF2O75151 1096 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 VSIG10L2P0DP72 767 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RBP3P10745 1247 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PDE6AP16499 860 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ACVRL1P37023 503 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 MC3RP41968 323 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 INF2Q27J81 1249 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CT83Q5H943 113 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 LCE4AQ5TA78 99 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PGBD2Q6P3X8 592 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RSRC2Q7L4I2 434 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SRGAP1Q7Z6B7 1085 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 GGNQ86UU5 652 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 OSTM1Q86WC4 334 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SPICE1Q8N0Z3 855 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 TXLNBQ8N3L3 684 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 C1orf162Q8NEQ5 155 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDH19Q8TAB3 1148 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 TEKT5Q96M29 485 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 GBP4Q96PP9 640 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 EYA3Q99504 573 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RHOBTB2Q9BYZ6 727 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 KATNBL1Q9H079 304 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 NRDE2Q9H7Z3 1164 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF287Q9HBT7 754 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RXFP1Q9HBX9 757 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 DBF4Q9UBU7 674 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SWAP70Q9UH65 585 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 NARFQ9UHQ1 456 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CORO2BQ9UQ03 480 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 GPR45Q9Y5Y3 372 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 LTBP2Q14767 1821 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PSME4Q14997 1843 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RGPD2P0DJD1 1756 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ANO9A1A5B4 782 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 H3BUI4 141 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ABLIM3O94929 683 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 NUDT3O95989 172 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CLEC2LP0C7M8 214 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 HKR1P10072 659 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PTPN1P18031 435 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 FAM193AP78312 1265 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ICA1Q05084 483 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PCOLCEQ15113 449 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 EPHA7Q15375 998 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC10A5Q5PT55 438 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 MIGA2Q7L4E1 593 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 DENND1CQ8IV53 801 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SH2D3CQ8N5H7 860 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 CLRN3Q8NCR9 226 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ARRDC4Q8NCT1 418 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 RAX2Q96IS3 184 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ZSCAN31Q96LW9 406 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC2A13Q96QE2 648 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ACE2Q9BYF1 805 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 ARMT1Q9H993 441 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 AS3MTQ9HBK9 375 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PNPLA8Q9NP80 782 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 SARS2Q9NP81 518 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 TOPORSQ9NS56 1045 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 PLA2G3Q9NZ20 509 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 H2AFY2Q9P0M6 372 aaPredicted RBP2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 LRFN1Q9P244 771 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 USP18Q9UMW8 372 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 MAST3O60307 1309 aa2.2□□□□□ -2.06
SMCHD1-211ENST00000584897 A0A0G2JLW4 131 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 A0A1W2PPL8 197 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 KRTAP23-1A1A580 65 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 PRAMEF22A3QJZ6 481 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CAPN8A6NHC0 703 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 B4GALT3O60512 393 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 ABHD16AO95870 558 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 LAG3P18627 525 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 KRT9P35527 623 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CHKAP35790 457 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CASP2P42575 452 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 CCT4P50991 539 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 KIR3DS1Q14943 382 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC44A4Q53GD3 710 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 FBXO38Q6PIJ6 1188 aa2.19□□□□□ -2.06
SMCHD1-211ENST00000584897 MAMDC4Q6UXC1 1216 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms