RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 MGAT1P26572 445 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 CLRN1P58418 232 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 RNASE9P60153 205 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 BTKQ06187 659 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 ZMYM3Q14202 1370 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 KHDC1LQ5JSQ8 128 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 DPP9Q86TI2 863 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM186BQ8IYM0 893 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 SMRP1Q8NCR6 262 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 ACRBPQ8NEB7 543 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 FBXO18Q8NFZ0 1043 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 IL31RAQ8NI17 732 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 STON2Q8WXE9 905 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 DDX17Q92841 729 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 PHKBQ93100 1093 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 CEP95Q96GE4 821 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 SELENOOQ9BVL4 669 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 SIK2Q9H0K1 926 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 MRPL46Q9H2W6 279 aaKnown RBP4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 ATP6V0A4Q9HBG4 840 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 STAP2Q9UGK3 403 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 OGDHLQ9ULD0 1010 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 PADI4Q9UM07 663 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 RIPOR2Q9Y4F9 1068 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 ZNF521Q96K83 1311 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 RHPN2P1A8MT19 583 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 RASA4BC9J798 803 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 MYO1FO00160 1098 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 LEFTY2O00292 366 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 KIAA0391O15091 583 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 TP73O15350 636 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 RASA4O43374 803 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 LDHAP00338 332 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 POMCP01189 267 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 GNAI2P04899 355 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 EN2P19622 333 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC7A1P30825 629 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 PROK1P58294 105 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 MXRA7P84157 204 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 HABP2Q14520 560 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 LONRF1Q17RB8 773 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 BMT2Q1RMZ1 405 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC44A4Q53GD3 710 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 CCDC93Q567U6 631 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 ATG9BQ674R7 924 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 DRICH1Q6PGQ1 229 aaPredicted RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 TOGARAM2Q6ZUX3 1019 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 MORC1Q86VD1 984 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 PDSS2Q86YH6 399 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 SMC5Q8IY18 1101 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 DCBLD1Q8N8Z6 715 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 ADAM2Q99965 735 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 NAA15Q9BXJ9 866 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 UNKQ9C0B0 810 aaKnown RBP4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 BRD9Q9H8M2 597 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF287Q9HBT7 754 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 PNPLA8Q9NP80 782 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 JKAMPQ9P055 326 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 CPA4Q9UI42 421 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 MED16Q9Y2X0 877 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 PCDHA1Q9Y5I3 950 aa4.58□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF804BA4D1E1 1349 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 TBKBP1A7MCY6 615 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC43A1O75387 559 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 CHEK2O96017 543 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 MYL3P08590 195 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SPATA31D3P0C874 917 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 RARBP10826 455 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 BRAFP15056 766 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 NPR1P16066 1061 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ZKSCAN1P17029 563 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 KCNJ5P48544 419 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ALDH5A1P51649 535 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SOX8P57073 446 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 KIF22Q14807 665 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 CNGA2Q16280 664 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 AKNAD1Q5T1N1 836 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ATXN7L2Q5T6C5 722 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF529Q6P280 563 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF783Q6ZMS7 281 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SPATA31D4Q6ZUB0 917 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF365Q70YC5 407 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SRLQ86TD4 932 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 PPP1R3BQ86XI6 285 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SPICE1Q8N0Z3 855 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 OR6B3Q8NGW1 331 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 TFAP2CQ92754 450 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 TNPO1Q92973 898 aaKnown RBP4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 MSLNLQ96KJ4 702 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 MRGPRX1Q96LB2 322 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 CCDC138Q96M89 665 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 ZNF48Q96MX3 618 aaPredicted RBP4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 NT5C1BQ96P26 610 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 POLR3GLQ9BT43 218 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 TEX101Q9BY14 249 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 LRIT1Q9P2V4 623 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SLC23A1Q9UHI7 598 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 SNX13Q9Y5W8 968 aa4.57□□□□□ -1.68
SMCHD1-209ENST00000583441 THP07101 528 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms