RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 AAK1Q2M2I8 961 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 VARS2Q5ST30 1063 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KIAA0319Q5VV43 1072 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CYP26C1Q6V0L0 522 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNF571Q7Z3V5 609 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ACOT1Q86TX2 421 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 NOP9Q86U38 636 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CEP57Q86XR8 500 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 KLHL23Q8NBE8 558 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNF606Q8WXB4 792 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 DDX1Q92499 740 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SYT11Q9BT88 431 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 HERC2P3Q9BVR0 1158 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 DNAI2Q9GZS0 605 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 DPEP3Q9H4B8 488 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 STK39Q9UEW8 545 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 NOCTQ9UK39 431 aaKnown RBP17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 CDH9Q9ULB4 789 aa17.4■□□□□ 0.38
CDK5RAP3-228ENST00000583363 SSU72P8A0A1W2PR75 194 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 C5orf67F2Z3F1 127 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TBC1D4O60343 1298 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 RB1P06400 928 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CHRNB2P17787 502 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PTPN1P18031 435 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ACAT1P24752 427 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PCSK1P29120 753 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 GNA15P30679 374 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 EIF4A3P38919 411 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ASTE1Q2TB18 679 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 RTP2Q5QGT7 225 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SPRED2Q7Z698 418 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ZNF677Q86XU0 584 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CCDC112Q8NEF3 446 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 EPS8L1Q8TE68 723 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ARNTL2Q8WYA1 636 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TFAP2BQ92481 460 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TNIP3Q96KP6 325 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 B3GALT6Q96L58 329 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 AGPAT1Q99943 283 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ZSWIM1Q9BR11 485 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 C17orf80Q9BSJ5 609 aa17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 NHEJ1Q9H9Q4 299 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PUF60Q9UHX1 559 aaKnown RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 COL4A4P53420 1690 aaPredicted RBP17.39■□□□□ 0.37
CDK5RAP3-228ENST00000583363 H7C4K7 107 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ATP2C2O75185 946 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CD19P15391 556 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TNFAIP3P21580 790 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CTNNB1P35222 781 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 DEKP35659 375 aaKnown RBP17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PDE6CP51160 858 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ERVK-21P61565 698 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CCZ1BP86790 482 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CCZ1P86791 482 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CDR2Q01850 454 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 DSG1Q02413 1049 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CNGA2Q16280 664 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 FAM171BQ6P995 826 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ANKS3Q6ZW76 656 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 C12orf29Q8N999 325 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 B3GALNT2Q8NCR0 500 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 OR10T2Q8NGX3 314 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LNX1Q8TBB1 728 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SLC20A1Q8WUM9 679 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SAMD11Q96NU1 681 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LPIN3Q9BQK8 851 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SYT15Q9BQS2 421 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 OXCT2Q9BYC2 517 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 KCNF1Q9H3M0 494 aa17.38■□□□□ 0.37
CDK5RAP3-228ENST00000583363 VWA8A3KMH1 1905 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MYBPHLA2RUH7 354 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 OR6C75A6NL08 312 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 THAP12O43422 761 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 MMEP08473 750 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 BRD2P25440 801 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ANXA13P27216 316 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PSMC1P62191 440 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 FMO1Q01740 532 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CTXN3Q4LDR2 81 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SGO2Q562F6 1265 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TDRD12Q587J7 1177 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 INTS6LQ5JSJ4 861 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TAF3Q5VWG9 929 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ARHGAP17Q68EM7 881 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LRRTM3Q86VH5 581 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 GPR65Q8IYL9 337 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CCDC170Q8IYT3 715 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 VPS52Q8N1B4 723 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SLC30A5Q8TAD4 765 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 OLIG1Q8TAK6 271 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 SPPL3Q8TCT6 385 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PIK3R5Q8WYR1 880 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CCDC42Q96M95 316 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TGS1Q96RS0 853 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 TMEM209Q96SK2 561 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 PKMYT1Q99640 499 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 ZCWPW1Q9H0M4 648 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 CRTAC1Q9NQ79 661 aa17.37■□□□□ 0.37
CDK5RAP3-228ENST00000583363 LZTS1Q9Y250 596 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms