RNA–Protein interactions for RNA: ENST00000582482.1

CDK5RAP3-225, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 2,455 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-225ENST00000582482 IER5Q5VY09 327 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MAMDC4Q6UXC1 1216 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 HOOK3Q86VS8 718 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLC4A11Q8NBS3 891 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PEBP4Q96S96 227 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TRIM56Q9BRZ2 755 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 INTS9Q9NV88 658 aaKnown RBP11.29□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DNAJC25-GNG10A0A024R161 153 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 H0YCG3 227 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 M0QYV0 167 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SGK1O00141 431 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LRCH4O75427 683 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 LGALS2P05162 132 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 HSPA6P17066 643 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TBXAS1P24557 533 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ADORA2AP29274 412 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 BPIFB4P59827 614 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATP11AP98196 1134 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ARHGAP1Q07960 439 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CNGA2Q16280 664 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SLC10A6Q3KNW5 377 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAXCQ5TGI0 409 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 EMC10Q5UCC4 262 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZPBP2Q6X784 338 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C4orf33Q8N1A6 199 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ATL2Q8NHH9 583 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NLRP7Q8WX94 980 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RBM15Q96T37 977 aaKnown RBP eCLIP11.28□□□□□ -0.62e-8■■■■■ 32.5
CDK5RAP3-225ENST00000582482 KLF6Q99612 283 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 WDR83Q9BRX9 315 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PDZD7Q9H5P4 517 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SYNCQ9H7C4 482 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FGFR1OP2Q9NVK5 253 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 AGAP1Q9UPQ3 857 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 CNTN6Q9UQ52 1028 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 IGKV6-21A0A0C4DH24 114 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 MICAL2O94851 1124 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TTC4O95801 387 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 PROZP22891 400 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FAM133BQ5BKY9 247 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 TSHZ1Q6ZSZ6 1077 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZC3H18Q86VM9 953 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF677Q86XU0 584 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 NDRG1Q92597 394 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ZNF317Q96PQ6 595 aaPredicted RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 B3GNT5Q9BYG0 378 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 FZD8Q9H461 694 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 RPF1Q9H9Y2 349 aaKnown RBP11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 ABCF3Q9NUQ8 709 aa11.28□□□□□ -0.6
CDK5RAP3-225ENST00000582482 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.6
CDK5RAP3-225ENST00000582482 hCG_1818297A0A087WSY0 165 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SPDYE5A6NIY4 337 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C3orf70A6NLC5 250 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ACKR2O00590 384 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ASAP2O43150 1006 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PSTPIP1O43586 416 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 LGR5O75473 907 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MYBL1P10243 752 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GCAP28676 217 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 OTUD4Q01804 1114 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SGSM1Q2NKQ1 1148 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TTC31Q49AM3 519 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 PPP1R15BQ5SWA1 713 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FAM47EQ6ZV65 393 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 UNC45BQ8IWX7 931 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MORC4Q8TE76 937 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CLEC4CQ8WTT0 213 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HEXIM2Q96MH2 286 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 EIF2AQ9BY44 585 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 MRPL47Q9HD33 250 aaKnown RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SETD4Q9NVD3 440 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HAUS2Q9NVX0 235 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KLK14Q9P0G3 267 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 WHRNQ9P202 907 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 NAALADL1Q9UQQ1 740 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GOLGA8RI6L899 631 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CST8O60676 142 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 AVILO75366 819 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KIAA0754O94854 1291 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 GAS8O95995 478 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TNNC2P02585 160 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 KRT3P12035 628 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CDKN2BP42772 138 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 SLC1A1P43005 524 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 HIC1Q14526 733 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 FNBP1LQ5T0N5 605 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ZNF618Q5T7W0 954 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 C6orf89Q6UWU4 347 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 CCDC125Q86Z20 511 aa11.27□□□□□ -0.61
CDK5RAP3-225ENST00000582482 ANKRD13AQ8IZ07 590 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms