RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 STAU1O95793 577 aaKnown RBP20.88■□□□□ 0.93
SREBF1-220ENST00000581707 AOC1P19801 751 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 WARSP23381 471 aaKnown RBP20.88■□□□□ 0.93
SREBF1-220ENST00000581707 CYP2F1P24903 491 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 GABRR2P28476 465 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 TNNC1P63316 161 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 FAM160A1Q05DH4 1040 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 BIRC3Q13489 604 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 TMC2Q8TDI7 906 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 SYAP1Q96A49 352 aaPredicted RBP20.88■□□□□ 0.93
SREBF1-220ENST00000581707 ATXN3LQ9H3M9 355 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 TBC1D17Q9HA65 648 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 TRPV4Q9HBA0 871 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 CDH9Q9ULB4 789 aa20.88■□□□□ 0.93
SREBF1-220ENST00000581707 PI15O43692 258 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 ATP2C2O75185 946 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 TACC1O75410 805 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 C4BPAP04003 597 aaKnown RBP20.87■□□□□ 0.93
SREBF1-220ENST00000581707 PDGFRBP09619 1106 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 FAM163BP0C2L3 166 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 GNL1P36915 607 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-220ENST00000581707 PTPN5P54829 565 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 DLG4P78352 724 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 NFIL3Q16649 462 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 CCDC142Q17RM4 750 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 SLC44A4Q53GD3 710 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 ARHGAP15Q53QZ3 475 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 TDRD10Q5VZ19 366 aaKnown RBP20.87■□□□□ 0.93
SREBF1-220ENST00000581707 FAM171BQ6P995 826 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 SPATA2LQ8IUW3 424 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-220ENST00000581707 SHDQ96IW2 340 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 SYT15Q9BQS2 421 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 XYLT2Q9H1B5 865 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 SNX25Q9H3E2 840 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 RMND1Q9NWS8 449 aa20.87■□□□□ 0.93
SREBF1-220ENST00000581707 NXF1Q9UBU9 619 aaKnown RBP20.87■□□□□ 0.93
SREBF1-220ENST00000581707 MAPK13O15264 365 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 GALR2O43603 387 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 NR2F2P24468 414 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 RPL13P26373 211 aaKnown RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 CDC25CP30307 473 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 VIPR2P41587 438 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 GPR15P49685 360 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 RPL10AP62906 217 aaKnown RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 NHLH1Q02575 133 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 TCF15Q12870 199 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 CFAP221Q4G0U5 840 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 STXBP5Q5T5C0 1151 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 GPR158Q5T848 1215 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 PHLDB3Q6NSJ2 640 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 C4orf50Q6ZRC1 276 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 FUBP3Q96I24 572 aaKnown RBP eCLIP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 GCNAQ96QF7 691 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 MRPL45Q9BRJ2 306 aaKnown RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 TRMT61BQ9BVS5 477 aaKnown RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 IL21Q9HBE4 155 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 CIZ1Q9ULV3 898 aaPredicted RBP20.86■□□□□ 0.93
SREBF1-220ENST00000581707 CACNA1HO95180 2353 aa20.86■□□□□ 0.93
SREBF1-220ENST00000581707 IKBKBO14920 756 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 SMC2O95347 1197 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 HMGA1P17096 107 aaKnown RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 PSMC3P17980 439 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 STARD6P59095 220 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 PSMC1P62191 440 aaKnown RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 ADAM9Q13443 819 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 NCOA4Q13772 614 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 GRM2Q14416 872 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 MAPRE1Q15691 268 aaKnown RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 DDR2Q16832 855 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 SDHAF4Q5VUM1 108 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 VITQ6UXI7 678 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 SMYD4Q8IYR2 804 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 OR6B3Q8NGW1 331 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 E2F7Q96AV8 911 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 TIGD1Q96MW7 591 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 GSDMAQ96QA5 445 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 VRTNQ9H8Y1 702 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 CRTAC1Q9NQ79 661 aa20.85■□□□□ 0.93
SREBF1-220ENST00000581707 MAGEC2Q9UBF1 373 aaPredicted RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 HOOK1Q9UJC3 728 aaKnown RBP20.85■□□□□ 0.93
SREBF1-220ENST00000581707 AKAP3O75969 853 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 CLSTN1O94985 981 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 VNN1O95497 513 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 CSH1P0DML2 217 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 CSH2P0DML3 217 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 MAGEA11P43364 429 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 VAMP7P51809 220 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 PRKCQQ04759 706 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 MLF2Q15773 248 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-220ENST00000581707 ZNF699Q32M78 642 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 ARID3BQ8IVW6 561 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-220ENST00000581707 MKNK1Q9BUB5 465 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 TASP1Q9H6P5 420 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 BRD9Q9H8M2 597 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 MAGED2Q9UNF1 606 aaPredicted RBP20.84■□□□□ 0.93
SREBF1-220ENST00000581707 SIT1Q9Y3P8 196 aa20.84■□□□□ 0.93
SREBF1-220ENST00000581707 DENND4CQ5VZ89 1909 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 HEPACAM2A8MVW5 462 aa20.83■□□□□ 0.93
SREBF1-220ENST00000581707 PSMC2P35998 433 aaKnown RBP20.83■□□□□ 0.93
SREBF1-220ENST00000581707 CYP4F8P98187 520 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms