RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 SYT11Q9BT88 431 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ZBP1Q9H171 429 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 DPEP3Q9H4B8 488 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ALG13Q9NP73 1137 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ACP6Q9NPH0 428 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CRTAC1Q9NQ79 661 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MRPL17Q9NRX2 175 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 FNIP2Q9P278 1114 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ARHGAP20Q9P2F6 1191 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MTRRQ9UBK8 725 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NOCTQ9UK39 431 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 COLQQ9Y215 455 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 IRAK3Q9Y616 596 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GBF1Q92538 1859 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 VWA8A3KMH1 1905 aa9.74□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NLRC5Q86WI3 1866 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SSU72P8A0A1W2PR75 194 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 FSCN2O14926 492 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GRM6O15303 877 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 THAP12O43422 761 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CALCAP01258 141 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 URODP06132 367 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CD19P15391 556 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 DNAJB1P25685 340 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 DNAJB2P25686 324 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ANXA13P27216 316 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 EIF4A3P38919 411 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PDE6CP51160 858 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TSPY1Q01534 308 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CDR2Q01850 454 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CREMQ03060 361 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SMARCB1Q12824 385 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GPR17Q13304 367 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PSMD5Q16401 504 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ASTE1Q2TB18 679 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PPP1R26Q5T8A7 1209 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SLC8B1Q6J4K2 584 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PDE12Q6L8Q7 609 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PRSS55Q6UWB4 352 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 LCLAT1Q6UWP7 414 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 RSPO2Q6UXX9 243 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CYP26C1Q6V0L0 522 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TMC7Q7Z402 723 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GPIHBP1Q8IV16 184 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TMEM139Q8IV31 216 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CCDC170Q8IYT3 715 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MRPL43Q8N983 215 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CCDC112Q8NEF3 446 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SLC30A5Q8TAD4 765 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TMEM209Q96SK2 561 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 HNRNPABQ99729 332 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CLSTN3Q9BQT9 956 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ZSWIM1Q9BR11 485 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 B3GNT5Q9BYG0 378 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 LMAN2LQ9H0V9 348 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 LHX5Q9H2C1 402 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NHEJ1Q9H9Q4 299 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 NGRNQ9NPE2 291 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 GTF3C4Q9UKN8 822 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MTUS1Q9ULD2 1270 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
CDK5RAP3-220ENST00000581160 O00370 1275 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 C2CD2LO14523 706 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 C1RP00736 705 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MMEP08473 750 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PLEKP08567 350 aaPredicted RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 BRD2P25440 801 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 OR1D2P34982 312 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PSMC1P62191 440 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 FMO1Q01740 532 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CAMK1Q14012 370 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 RAB33AQ14088 237 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SMC1AQ14683 1233 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PTPN14Q15678 1187 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TDRD12Q587J7 1177 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 MDH1BQ5I0G3 518 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PRPF38BQ5VTL8 546 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TAF3Q5VWG9 929 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TRIM72Q6ZMU5 477 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 C4orf50Q6ZRC1 276 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PAQR9Q6ZVX9 377 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 VPS36Q86VN1 386 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 FUKQ8N0W3 1084 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ANKRD52Q8NB46 1076 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 C2orf15Q8WU43 125 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 SLC20A1Q8WUM9 679 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ARNTL2Q8WYA1 636 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CCDC42Q96M95 316 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 KLHL5Q96PQ7 755 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TCF25Q9BQ70 676 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 EMILIN2Q9BXX0 1053 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 UBXN6Q9BZV1 441 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 ZNF518BQ9C0D4 1074 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 PDCL3Q9H2J4 239 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 CERS4Q9HA82 394 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TLR9Q9NR96 1032 aa9.72□□□□□ -0.85
CDK5RAP3-220ENST00000581160 TMLHEQ9NVH6 421 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms